Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00456 ATGTCCTTCTCCAAATTCTCTGCAACACACTTCATACTTCTCGCTTTGTTTCCATTTCTGAGTTTCACAACCGAAGCATCTCCTATTTTCAGCTCTCACGCCTGTACTGATTCACTCACTTACAAACCCAATAGCACAGTTGAAGCCAATTTAAATGTCCTTCTCTCTGTTCTCACGTCCAACGCCTCCCTCCACGACGGTTTCTTCCGTACCACCTTGGCTCAGGGAACTCCCGCCGTCATCAACGGCCTTTTCCTCTGCCGCGGCGACACCACCCCTAATCTCTGCCAAGAGTGCGTCGCCGACGCTGCCAAAGAGATAAGACGCCGGTGTCCAAATCAAACTGAATCTATTATCTGGTACGATGTTTGTCTTCTTCGCTACTCCAACAACACCTTCAACAACATAGTACCTTCAACAGACTTGTCGAATAATTCCAGTATAGCTAGCGCCGAACTGGATCAGTTCAATCAATTGTTGTCGAACATGCTGCAAAATTTGGCGGGTGAAGCTAAAGATTCACAGACGGGGAAGAAATTCGCCACAGGACAAGTGAACCTAGGATCGTCCCAAACGTTGTACGGCCTTGAACAGTGTTACCCTGACCTGTCGCCTTTTGATTGCAACATGTGTATTCAAAGCGCCATTGGAGCTTTGCCAAATTGTTGTAGTAACAAGAAAGGCGCATCGGTTCTACTTCCAGCATGTAACATTAGATATGAACTTTACCCATTTTACAACATAACCCAGACATCCTCTGCAGCACCAGTTCCTCCTCGATCAGGAAAAAGTAACATCTTAATAATTGTTGCCATTATTGTGCCGATTATTGTTTCTGTGACACTTTTTGTTGCGGCTTGTTGTTTCCTGCGCAAGAGGGCAAGCAAGAACAAGAAGTATAATACGTTCACGGAGAATGATATTGGGAATGATCTTACAGACGTAGAGTCTCTGCAATTTGAATTGGCGACAATAGAAGCTGCCACAAAAAGGTTCTCAGATGAGAACAAGATTGGCCAAGGTGGATTTGGTGCTGTTTATAAGGGTATCCTCCAAAATGGACAGGAGATTGCTGTGAAGAGGTTGTCGGTAACTTCATTGCAGGGTGCTTTGGAATTTAAGAATGAAGCTGCTCTTGTGGCCAAGCTTCAACACAGGAATTTAGTCAGGCTCTTGGGATTTTGCTTGGAGGGGCGAGAAAAGATACTTGTTTATGAATACATCCCAAACAAAAGCCTTGATCACTTTCTATTTGATTCTGAGAAGAAAGCAATGCTTAATTGGTCGAGGCGATACAAGATCATAATGGGAATTGCTCGAGGAATTCTTTATCTTCATGAAGATTCTCAACTTAGAATAATACATCGTGACCTCAAAGCGAGCAATGTTTTATTAGATGCCAACATGAACCCAAAAATTTCAGATTTTGGCATGGCTAGAATCTTTCATGGAGAACAAACTCAAGTAAACACGAGAAGAATAGTTGGAACCTTTGGTTATATGTCTCCAGAATATGCAATGCGCGGGCAATTTTCTGTCAAATCAGATGTGTTCAGCTTTGGTGTCTTAGTTTTGGAGATTGTTACAGGCAAGAAGAACACTGAGCTTTATCAATCACATGAAGCAGATGACCTCTTAAGCTATGCTTGGACAAATTGGACACAGAAAACACCTTTAGAGATGTTGGATCCAACACTGAGGGGTTCTTATTCAAGAAATGAAGTCATAAGATGCATCCATATTGCTTTATTATGTGTTCAGGAGAATCCTTCTGATAGACCTTCAATGGCAACCATAGCACTTATGCTCAACAGTTATTCTGTTACTTTGTCGTTACCACGACAGCCGGCGGCTTACATGCGCAGAACACCAAACAGACAAAAGAATGTTGTTGATTCTGATCAATCTACCTCTTCAATCCTATGGTCTACAAATGAAGCCTCTATTACTGGAGTTTACCCCCGCTAA 1968 0.4268 MSFSKFSATHFILLALFPFLSFTTEASPIFSSHACTDSLTYKPNSTVEANLNVLLSVLTSNASLHDGFFRTTLAQGTPAVINGLFLCRGDTTPNLCQECVADAAKEIRRRCPNQTESIIWYDVCLLRYSNNTFNNIVPSTDLSNNSSIASAELDQFNQLLSNMLQNLAGEAKDSQTGKKFATGQVNLGSSQTLYGLEQCYPDLSPFDCNMCIQSAIGALPNCCSNKKGASVLLPACNIRYELYPFYNITQTSSAAPVPPRSGKSNILIIVAIIVPIIVSVTLFVAACCFLRKRASKNKKYNTFTENDIGNDLTDVESLQFELATIEAATKRFSDENKIGQGGFGAVYKGILQNGQEIAVKRLSVTSLQGALEFKNEAALVAKLQHRNLVRLLGFCLEGREKILVYEYIPNKSLDHFLFDSEKKAMLNWSRRYKIIMGIARGILYLHEDSQLRIIHRDLKASNVLLDANMNPKISDFGMARIFHGEQTQVNTRRIVGTFGYMSPEYAMRGQFSVKSDVFSFGVLVLEIVTGKKNTELYQSHEADDLLSYAWTNWTQKTPLEMLDPTLRGSYSRNEVIRCIHIALLCVQENPSDRPSMATIALMLNSYSVTLSLPRQPAAYMRRTPNRQKNVVDSDQSTSSILWSTNEASITGVYPR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00456 655 CDD STKc_IRAK 338 604 - -
Accr11g00456 655 FunFam cysteine-rich receptor-like protein kinase 10 408 610 - -
Accr11g00456 655 Gene3D - 29 133 IPR038408 -
Accr11g00456 655 Gene3D - 139 245 IPR038408 -
Accr11g00456 655 ProSiteProfiles Gnk2-homologous domain profile. 136 245 IPR002902 -
Accr11g00456 655 Gene3D Transferase(Phosphotransferase) domain 1 408 613 - -
Accr11g00456 655 SMART serkin_6 332 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00456 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Accr11g00456 655 Pfam Protein tyrosine and serine/threonine kinase 335 600 IPR001245 GO:0004672|GO:0006468
Accr11g00456 655 Pfam Salt stress response/antifungal 152 243 IPR002902 -
Accr11g00456 655 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Accr11g00456 655 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 291 407 - -
Accr11g00456 655 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Accr11g00456 655 FunFam Cysteine-rich receptor-like protein kinase 10 139 245 - -
Accr11g00456 655 ProSiteProfiles Protein kinase domain profile. 332 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00456 655 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 133 - -
Accr11g00456 655 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Accr11g00456 655 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 650 - -
Accr11g00456 655 SUPERFAMILY Protein kinase-like (PK-like) 318 642 IPR011009 -
Accr11g00456 655 Gene3D Phosphorylase Kinase; domain 1 291 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00456 Accr-Chr11 5820656 5823659 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00456 13 655 Receptor kinase-like Gene Family AT4G05200 49.028 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr11g00456 PK_Tyr_Ser-Thr 2.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00456 - - gmx:113000776 878.626