Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00455 ATGTCCTTCTCCAAATTCTCTGCAACACACTTCATACTTCTCGCTTTGTTTCCATTTCTGAGTTTCACAACCGAAGCATCTCCTATTTTCAGCTCTCACGCCTGTACTGATTCACTCACTTACAAACCCAATAGCACAGTTGAAGCCAATTTAAATGTCCTTCTCTCTGTTCTCACGTCCAACGCCTCCCTCCACGACGGTTTCTTCCGTACCACCTTGGCTCAGGGAACTCCCGCCGTCATCAACGGCCTTTTCCTCTGCCGCGGCGACACCACCCCTAATCTCTGCCAAGAGTGCGTCGCCGACGCTGCCAAAGAGATAAGACGCCGGTGTCCAAATCAAACTGAATCTATTATCTGTATAGCTAGCGCCGAACTGGATCAGTTCAATCAATTGTTGTCGAACATGCTGCAAAATTTGGCGGGTGAAGCTAAAGATTCACAGACGGGGAAGAAATTCGCCACAGGACAAGTGAACCTAGGATCGTCCCAAACGTTGTACGGCCTTGAACAGTGTTACCCTGACCTGTCGCCTTTTGATTGCAACATGTGTATTCAAAGCGCCATTGGAGCTTTGCCAAATTGTTGTAGTAACAAGAAAGGCGCATCGGTTCTACTTCCAGCATGTAACATTAGATATGAACTTTACCCATTTTACAACATAACCCAGACATCCTCTGCAGCACCAGTTCCTCCTCGATCAGGAAAAAGTAACATCTTAATAATTGTTGCCATTATTGTGCCGATTATTGTTTCTGTGACACTTTTTGTTGCGGCTTGTTGTTTCCTGCGCAAGAGGGCAAGCAAGAACAAGAAGTATAATACGTTCACGGAGAATGATATTGGGAATGATCTTACAGACGTAGAGTCTCTGCAATTTGAATTGGCGACAATAGAAGCTGCCACAAAAAGGTTCTCAGATGAGAACAAGATTGGCCAAGGTGGATTTGGTGCTGTTTATAAGGGTATCCTCCAAAATGGACAGGAGATTGCTGTGAAGAGGTTGTCGGTAACTTCATTGCAGGGTGCTTTGGAATTTAAGAATGAAGCTGCTCTTGTGGCCAAGCTTCAACACAGGAATTTAGTCAGGCTCTTGGGATTTTGCTTGGAGGGGCGAGAAAAGATACTTGTTTATGAATACATCCCAAACAAAAGCCTTGATCACTTTCTATTTGATTCTGAGAAGAAAGCAATGCTTAATTGGTCGAGGCGATACAAGATCATAATGGGAATTGCTCGAGGAATTCTTTATCTTCATGAAGATTCTCAACTTAGAATAATACATCGTGACCTCAAAGCGAGCAATGTTTTATTAGATGCCAACATGAACCCAAAAATTTCAGATTTTGGCATGGCTAGAATCTTTCATGGAGAACAAACTCAAGTAAACACGAGAAGAATAGTTGGAACCTTTGGTTATATGTCTCCAGAATATGCAATGCGCGGGCAATTTTCTGTCAAATCAGATGTGTTCAGCTTTGGTGTCTTAGTTTTGGAGATTGTTACAGGCAAGAAGAACACTGAGCTTTATCAATCACATGAAGCAGATGACCTCTTAAGCTATGCTTGGACAAATTGGACACAGAAAACACCTTTAGAGATGTTGGATCCAACACTGAGGGGTTCTTATTCAAGAAATGAAGTCATAAGATGCATCCATATTGCTTTATTATGTGTTCAGGAGAATCCTTCTGATAGACCTTCAATGGCAACCATAGCACTTATGCTCAACAGTTATTCTGTTACTTTGTCGTTACCACGACAGCCGGCGGCTTACATGCGCAGAACACCAAACAGACAAAAGAATGTTGTTGATTCTGATCAATCTACCTCTTCAATCCTATGGTCTACAAATGAAGCCTCTATTACTGGAGTTTACCCCCGCTAA 1887 0.4277 MSFSKFSATHFILLALFPFLSFTTEASPIFSSHACTDSLTYKPNSTVEANLNVLLSVLTSNASLHDGFFRTTLAQGTPAVINGLFLCRGDTTPNLCQECVADAAKEIRRRCPNQTESIICIASAELDQFNQLLSNMLQNLAGEAKDSQTGKKFATGQVNLGSSQTLYGLEQCYPDLSPFDCNMCIQSAIGALPNCCSNKKGASVLLPACNIRYELYPFYNITQTSSAAPVPPRSGKSNILIIVAIIVPIIVSVTLFVAACCFLRKRASKNKKYNTFTENDIGNDLTDVESLQFELATIEAATKRFSDENKIGQGGFGAVYKGILQNGQEIAVKRLSVTSLQGALEFKNEAALVAKLQHRNLVRLLGFCLEGREKILVYEYIPNKSLDHFLFDSEKKAMLNWSRRYKIIMGIARGILYLHEDSQLRIIHRDLKASNVLLDANMNPKISDFGMARIFHGEQTQVNTRRIVGTFGYMSPEYAMRGQFSVKSDVFSFGVLVLEIVTGKKNTELYQSHEADDLLSYAWTNWTQKTPLEMLDPTLRGSYSRNEVIRCIHIALLCVQENPSDRPSMATIALMLNSYSVTLSLPRQPAAYMRRTPNRQKNVVDSDQSTSSILWSTNEASITGVYPR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00455 628 Pfam Salt stress response/antifungal 35 120 IPR002902 -
Accr11g00455 628 Pfam Salt stress response/antifungal 126 216 IPR002902 -
Accr11g00455 628 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Accr11g00455 628 SUPERFAMILY Protein kinase-like (PK-like) 291 615 IPR011009 -
Accr11g00455 628 ProSiteProfiles Gnk2-homologous domain profile. 110 218 IPR002902 -
Accr11g00455 628 Gene3D Transferase(Phosphotransferase) domain 1 381 586 - -
Accr11g00455 628 Pfam Protein tyrosine and serine/threonine kinase 308 573 IPR001245 GO:0004672|GO:0006468
Accr11g00455 628 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 264 380 - -
Accr11g00455 628 Gene3D Phosphorylase Kinase; domain 1 264 380 - -
Accr11g00455 628 ProSiteProfiles Protein kinase domain profile. 305 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00455 628 FunFam cysteine-rich receptor-like protein kinase 10 381 583 - -
Accr11g00455 628 SMART serkin_6 305 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00455 628 FunFam Cysteine-rich receptor-like protein kinase 10 114 218 - -
Accr11g00455 628 CDD STKc_IRAK 311 577 - -
Accr11g00455 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Accr11g00455 628 Gene3D - 124 218 IPR038408 -
Accr11g00455 628 Gene3D - 29 123 IPR038408 -
Accr11g00455 628 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00455 Accr-Chr11 5820656 5823659 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00455 13 628 Receptor kinase-like Gene Family AT4G05200 47.235 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr11g00455 PK_Tyr_Ser-Thr 2.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00455 - - gmx:113000776 829.706