Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00453 ATGTCCATCTTCATCTTCCTCTCTCTCTTGGGATTTCTGCGCTTCACAAGCGAAGCTGCTTCAGCTTTCAGTTTCACAAGTCATTCCTGTAGTACTAGCAATGGAACCTATTTTGAACCCAACAGTACATTTCAAGCCAATTTGAATGTCCTTCTCTCTTCCCTCACCTCCAACGCCTCTCTTCCTGACGGTTACTACCGCACCACCGTGTCCGCCTCGTCCCCTTCCAACGTCACCGGACTTTTCCTCTGTCGAGGTGACACCACCCCCGCCGTGTGCCAATCTTGCGTCGCCGCCGCATCCATGGAGATAACACGCCGATGCCCAAACCAAACAGAGTCCATAATCTGGTACAATGTGTGTATGCTTCGTTACTCGAACAGGGACTTGAACCCCTTGGTTCCTTATGTGCCTTTGGGAAACATCAGCACCATAGCTATCTCGGAACGGGACCGGTTCGACGCCGTGCTGGTGAACATGTTGAATGATGTGACAGGAAAAGCTAATACCCAGACGGGGAAGAAGTTTGCAACGGCGGAAGTGGACTTCACGTCGTCGGAAACCTTGTATTTCCTCGCACAGTGCATTCCTGACTCGTCCAATTCTATTTGTTATTCTTGTTTCAGAAGTGCCATCGGATTTCTTCCAGATTGCTGTAGTGGGAGCAAGGGGGCAACGATTCTGGTTCCATTATGTAATATAAGATATGAATTTTATCCGTTTTACAATAGAGCCGTCGTATCCTCTGAACCACTAGTTCCTCCTACTTCAGGAAGTAGAAATATCTTATTGCTTGTTGCGACTCTTGTCCCGGTTCTTGTTGCTTTGGCACTTCTCGTTGTGGGTTGTTGTTTCCTTCGTAAGAGAGCAAGCAAGAAGTACAACACATACACATTCACAGAGGATTCAACCGGGATTGATCTTTCAGGGATAGAGTCTTTGAAATTTGAATTGGCTGCAATAGAAGCTGCCACGAAAAAGTTCTCAGATGAGAACAAGATTGGCCAAGGTGGATATGGGGCAGTTTACAAGGGCATCCTTGCAAACGGACAGGAGATAGCTGTGAAGAGGTTGTTGGCAACCTCCTTGCAGGGTGCTTTGGAGTTTACAAATGAAGCTGCTCTTATGGTTAAGCTTCAACACAGGAATTTAGTGAGGCTCTTGGGATTTTGCTTAGAAGGGCAAGAGAAGATACTTGTCTATGAATATATCCCAAACAAAAGCCTTGACAAGTTTCTTTTTGGTTAG 1248 0.4639 MSIFIFLSLLGFLRFTSEAASAFSFTSHSCSTSNGTYFEPNSTFQANLNVLLSSLTSNASLPDGYYRTTVSASSPSNVTGLFLCRGDTTPAVCQSCVAAASMEITRRCPNQTESIIWYNVCMLRYSNRDLNPLVPYVPLGNISTIAISERDRFDAVLVNMLNDVTGKANTQTGKKFATAEVDFTSSETLYFLAQCIPDSSNSICYSCFRSAIGFLPDCCSGSKGATILVPLCNIRYEFYPFYNRAVVSSEPLVPPTSGSRNILLLVATLVPVLVALALLVVGCCFLRKRASKKYNTYTFTEDSTGIDLSGIESLKFELAAIEAATKKFSDENKIGQGGYGAVYKGILANGQEIAVKRLLATSLQGALEFTNEAALMVKLQHRNLVRLLGFCLEGQEKILVYEYIPNKSLDKFLFG 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00453 415 ProSiteProfiles Gnk2-homologous domain profile. 25 130 IPR002902 -
Accr11g00453 415 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 6 248 - -
Accr11g00453 415 Pfam Salt stress response/antifungal 30 127 IPR002902 -
Accr11g00453 415 Pfam Salt stress response/antifungal 148 238 IPR002902 -
Accr11g00453 415 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 23 130 - -
Accr11g00453 415 SUPERFAMILY Protein kinase-like (PK-like) 307 414 IPR011009 -
Accr11g00453 415 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Accr11g00453 415 FunFam Cysteine-rich receptor-like protein kinase 10 288 403 - -
Accr11g00453 415 Gene3D Phosphorylase Kinase; domain 1 288 403 - -
Accr11g00453 415 ProSiteProfiles Gnk2-homologous domain profile. 135 241 IPR002902 -
Accr11g00453 415 FunFam Cysteine-rich receptor-like protein kinase 10 138 241 - -
Accr11g00453 415 Gene3D - 139 241 IPR038408 -
Accr11g00453 415 Gene3D - 22 129 IPR038408 -
Accr11g00453 415 Pfam Protein tyrosine and serine/threonine kinase 331 413 IPR001245 GO:0004672|GO:0006468
Accr11g00453 415 ProSiteProfiles Protein kinase domain profile. 328 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00453 Accr-Chr11 5799815 5801457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00453 2 414 Receptor kinase-like Gene Family AT4G05200 41.570 4.63e-104 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr11g00453 Stress-antifung 5.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00453 - - lja:Lj0g3v0096479.1 431.024