Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00452 ATGTCCATCTTCTTCATCCTCCTCTTTCTCTCGATATTTCTGACCTTCACAAGCGAAGCTGCTCCAATTTACAGAACTCATGCCTGTACGAATGGAAGCTTTTTCGAACCCAACTCTACGTTCCAAGCCAATTTGAATGTCTTTCTCTCTTTCCTCACCTCCAACGCCTCTCTCCCCGACGGTTACTACCGTACCACCGTGTCCCCATCAACCCCTCCCACCATCACCGGACTTTTCCTCTGTCGCGGAGACGTCACCCCCGCCGTGTGCCAATCCTGCGTCGCCGCTGCATCCACCGAGATAACGCGCCGCTGCCCAAACCAAACAGAGTCTATAATCTGGTACGACGAGTGTATGCTTCGTTACTCGAACGGGAACTTGAACCCCATGGTTCCTTACGTGCCTATGGGAAACACCAACACCATTCCTAGCTCCGAATGGGGTCGATTCGAAGACTTGCTAGCGAACATGTTGAATGGAGTGACTCAAAAGGCTAATACCCAGATGGGAAAGAGGTTTGCTACGGCGGAAATGAACTTCACGTCGTCGGAAACCGTGTACAGCCTCGCACAGTGCATTCCTGATTCTTCCGATTGTAATTCTTGTTTCAGTAGTGCCATTGCTACTCTTCCAAATTGCTGTAATAGAAGCAAAGGAGCAACGATTTTGGTTCCATCATGTAATCTAAGATACGAATTTTATCCATTTTACAATATAGCCCATGTATCCTCTGAACCACTAGTTCCTCCAACTTCAGGAAGTAGAAATATCTCAATGATTGTTGCGATTGTTGTCCCGGTTGTTGTTGTTTTTTCACTTTTCGTTGTGGGTTGTTGTTTCCTCCGTAAGAGAGCAAGCAAGAAGTACAACACGTTCACACAGGATTCAACTGGGATTGATATGTCAGAGATAGAGTCTTTGCAATTTGAATTGGCTACAATAGAAGCTGCCACGAAAAAGTTCTCAGATGAGAACAAGATTGGCCAAGGTGGATTTGGGGTAGTTTACAAGGGTCTCCTTCCAAACGGACAGGAGATAGCAGTGAAGAGGTTGTCTGTAACCTCCTTGCAGGGTGCTTCGGAGTTCACAAATGAGGCTGCCCTTGTGGCCAAGCTTCAACACAGGAATTTAGTGAGGTTGTTGGGATTTTGCTTAGAGGGGCAAGAGAAGATACTTATCTATGAATATATCCCAAACAAAAGCCTTGACAATTTTCTATTTGATCCAGAAAGGAAGAGAATACTAGATTGGTCGAAACGCTACAAGATTATTGCAGGCGTTGCTCGAGGAATGCTATATCTCCATGAGGATTCTCAACTTAGAATAATTCATCGTGATCTCAAAGCTAGTAATGTTTTACTAGATGCTAATATGATTCCGAGAATTTCAGACTTTGGCATGGCAAAAATCTTTCAAGGTGATCAGACTCAAGTAAATACGAGAAGAATAGTTGGGACCTATGGTTATATGTCTCCAGAATATGCAATGCATGGACAATTTTCTGTAAAGTCAGACGTATTTAGCTTTGGTGTCTTGCTTTTAGAGATTATTACCGGAAAGAAGAACACTGATTTGTACCAATTACCTCAAGCCAATGACCTCTTAATTTATGCCTGGAATAATTGGACACAAAAAACACCTTTGGAGTTGTTGGATCCAACACTGAGAGGTTCTTATTCGAGAAATGAAGTCATAAGATGCATTCATATTGCTTTATTGTGTGTTCAGGAGAATCCTTCTGATAGACCTTCGGTGGCAAATATAGTACTTATGCTCAATAGTTATTCTGTTACTTTGTCATTACCTCGAAAACCTGCATCATTTATGCGTAGAAGAACGCCAAACAGGCAAAACAACAAGGGTGTTGATTCAAACAAATCTACCGGTTCGATTCTATGTTCTACAAATGAAGAACCCATTACTGAAGTTTACCCTCGATAA 1941 0.4281 MSIFFILLFLSIFLTFTSEAAPIYRTHACTNGSFFEPNSTFQANLNVFLSFLTSNASLPDGYYRTTVSPSTPPTITGLFLCRGDVTPAVCQSCVAAASTEITRRCPNQTESIIWYDECMLRYSNGNLNPMVPYVPMGNTNTIPSSEWGRFEDLLANMLNGVTQKANTQMGKRFATAEMNFTSSETVYSLAQCIPDSSDCNSCFSSAIATLPNCCNRSKGATILVPSCNLRYEFYPFYNIAHVSSEPLVPPTSGSRNISMIVAIVVPVVVVFSLFVVGCCFLRKRASKKYNTFTQDSTGIDMSEIESLQFELATIEAATKKFSDENKIGQGGFGVVYKGLLPNGQEIAVKRLSVTSLQGASEFTNEAALVAKLQHRNLVRLLGFCLEGQEKILIYEYIPNKSLDNFLFDPERKRILDWSKRYKIIAGVARGMLYLHEDSQLRIIHRDLKASNVLLDANMIPRISDFGMAKIFQGDQTQVNTRRIVGTYGYMSPEYAMHGQFSVKSDVFSFGVLLLEIITGKKNTDLYQLPQANDLLIYAWNNWTQKTPLELLDPTLRGSYSRNEVIRCIHIALLCVQENPSDRPSVANIVLMLNSYSVTLSLPRKPASFMRRRTPNRQNNKGVDSNKSTGSILCSTNEEPITEVYPR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00452 646 SUPERFAMILY Protein kinase-like (PK-like) 307 616 IPR011009 -
Accr11g00452 646 ProSiteProfiles Gnk2-homologous domain profile. 23 127 IPR002902 -
Accr11g00452 646 FunFam Cysteine-rich receptor-like protein kinase 10 282 396 - -
Accr11g00452 646 FunFam cysteine-rich receptor-like protein kinase 10 397 599 - -
Accr11g00452 646 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 22 126 - -
Accr11g00452 646 ProSiteProfiles Gnk2-homologous domain profile. 130 236 IPR002902 -
Accr11g00452 646 MobiDBLite consensus disorder prediction 611 632 - -
Accr11g00452 646 Gene3D - 23 126 IPR038408 -
Accr11g00452 646 Gene3D - 133 236 IPR038408 -
Accr11g00452 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Accr11g00452 646 SMART serkin_6 321 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00452 646 CDD STKc_IRAK 327 593 - -
Accr11g00452 646 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Accr11g00452 646 FunFam Cysteine-rich receptor-like protein kinase 10 132 236 - -
Accr11g00452 646 ProSiteProfiles Protein kinase domain profile. 321 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00452 646 Gene3D Transferase(Phosphotransferase) domain 1 397 602 - -
Accr11g00452 646 Pfam Salt stress response/antifungal 147 233 IPR002902 -
Accr11g00452 646 Pfam Salt stress response/antifungal 29 124 IPR002902 -
Accr11g00452 646 Pfam Protein tyrosine and serine/threonine kinase 324 590 IPR001245 GO:0004672|GO:0006468
Accr11g00452 646 Gene3D Phosphorylase Kinase; domain 1 282 396 - -
Accr11g00452 646 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 637 - -
Accr11g00452 646 MobiDBLite consensus disorder prediction 607 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00452 Accr-Chr11 5788237 5790935 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00452 1 646 Receptor kinase-like Gene Family AT4G05200 49.031 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr11g00452 PK_Tyr_Ser-Thr 1.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00452 - - gmx:547727 842.802