Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00450 ATGGCGACTTCCAAATCCTACGCACTGCTCACTTCTCTTTTGGTGTTCCTAATTATTACCACCATCTTCTTCTTCACAAGCAAAGCAGATTCTTTTGATTACACAGCTCATTACTGTTCAAACGCCACCATCTTCCCGTCCAACACCGCCTTCCGACGAAACCTCAACGTCCTCCTCTCCTCCCTCACCTCCAATGCCTCTCAATTCGGCGGCTACTACATGACCATCGTGGGCTTCGGAACCACCGACGCCGTCAACGGCCTCTTCCTCTGCCGCGGCGACATCGTCTCCCCCACCACCTGCAAAGACTGCATCGCCGCCGCCGCCAAAGGCATAACTCTCCGTTGCCCTAACCGAACCGAAGCCATAATCTGGTACGACAAGTGCATGCTGCGTTACACCGGCGGCAAGTATTTCCTGTACGATAGCGTTAACCCCGGAATAAGCCTCCACGACGGCGGCAGTAGTGACTTGCAACAGCTCAACATCTCTGTATTCAAATTATTGAATGATTTGACTACAGAGGCTGCGAAATCACCGACGGTGAAGAAGTTTGCCGTCGGCCAAGTGATATTATCAAGCTCGCCGGCGGCGGTGAACACCACCGTGTATGGTTTAGAGCAGTGCATAGATGACTTGACCAGTGATCAATGTGAGACATGTCTGCGAGAAGCCATTGGAATTTTGGCTAATTGTTGTGAGGGAAAACAAGGCGCTAGGGTTCTTCTTGCTTCCTGCAACATCAGATACGAACTGTACCCTTTTTACAATGTAACAACCGTATCACCAATAAGATTGTCTCCTCCTTCAGGAAATGAGAAAACTGAAACACGAACAATTATTCTAATTGTCGTTCCAGTTTCAGTTGCTGTTTTGTGTCTTCAAGGGTTTTTCCTGCTGAAAAGACGGAAGAAGGATAAAACTGCAGTATTTAATTATGAAAGGAATGGAGAAGAAATTGCCCCTCTAGAGTCTTTGCAATTCTCTTTTGCTACAATTGAAGCTGCGACAAACAATTTCTCACAGCTCAACAAAATAGGCAAAGGTGGATTTGGGGAAGTCTACAAGGGTGTGCTTCCAGATAAACGAGAAATAGCTGTAAAGAAACTTTCAAGTAAATCCAAGCAGGGTGTGATGGAATTTAAAAATGAGATTTCACTAATTGCCAAGCTTCAACATAGAAACCTGGTTGCCTTATTTGGATTTTGCTTGCTAGAAGAGGAGAAAATGCTTATTTATGAATATGTTCCCAACAAGAGCTTGAATTACTTTTTATTTGATTCTGATCCAACTCGAAGGATATTGAATTGGTCTGAGCGTTTTAAGATAATAGGAGGTATAGCAAGAGGAATTCTATATCTACATGAGCATTCAAGGCTTAAAGTTATACACCGTGATCTCAAGCCCAGTAATGTGCTATTAGACGAAAACATGAATCCAAAAATATCAGATTTTGGTTTGGCAAGGATAGTCGCCATAGATCAAAATCAAGGAACTACTAATCAAATCGTTGGAACATTTGGTTATATGTCTCCTGAATATGCAATGCATGGACAATTTTCAGAAAAATCGGATGTATATAGTTTTGGAGTTATAATTCTTGAAATAGTTAGTGCAAAAAGAAATGCTCGATCCCCCAAGTCAAAGATTTTTGAAGATCTTTTAGGTCAGGCATGGACACAATGGAGGAATCATTCCACACTGGAAATTCTGGACTCAACCCTAAAAGAATCGTACTCTCCCACTGAAGCCAGAAAGTGCATTCAAATTGGGTTATTGTGCGTGCAAGAAGACCCAGATGATAGGCCTACAATGGCCACAATTATTTCATACCTTAACGCCCAATTAATTGAGTTGCCATTTCCAAGGGAACCTACACTCTTCAGGTACAGTATTGTAGAATGTTGCAATAGTAGTTCAGGTCAATCCTCCAATGATTCCACACCTTCCATCAATGACATGTCCAAGACTACTTTCTTCCCTCGATAG 1989 0.4284 MATSKSYALLTSLLVFLIITTIFFFTSKADSFDYTAHYCSNATIFPSNTAFRRNLNVLLSSLTSNASQFGGYYMTIVGFGTTDAVNGLFLCRGDIVSPTTCKDCIAAAAKGITLRCPNRTEAIIWYDKCMLRYTGGKYFLYDSVNPGISLHDGGSSDLQQLNISVFKLLNDLTTEAAKSPTVKKFAVGQVILSSSPAAVNTTVYGLEQCIDDLTSDQCETCLREAIGILANCCEGKQGARVLLASCNIRYELYPFYNVTTVSPIRLSPPSGNEKTETRTIILIVVPVSVAVLCLQGFFLLKRRKKDKTAVFNYERNGEEIAPLESLQFSFATIEAATNNFSQLNKIGKGGFGEVYKGVLPDKREIAVKKLSSKSKQGVMEFKNEISLIAKLQHRNLVALFGFCLLEEEKMLIYEYVPNKSLNYFLFDSDPTRRILNWSERFKIIGGIARGILYLHEHSRLKVIHRDLKPSNVLLDENMNPKISDFGLARIVAIDQNQGTTNQIVGTFGYMSPEYAMHGQFSEKSDVYSFGVIILEIVSAKRNARSPKSKIFEDLLGQAWTQWRNHSTLEILDSTLKESYSPTEARKCIQIGLLCVQEDPDDRPTMATIISYLNAQLIELPFPREPTLFRYSIVECCNSSSGQSSNDSTPSINDMSKTTFFPR 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00450 662 ProSiteProfiles Gnk2-homologous domain profile. 143 255 IPR002902 -
Accr11g00450 662 CDD STKc_IRAK 346 613 - -
Accr11g00450 662 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 32 138 - -
Accr11g00450 662 Pfam Salt stress response/antifungal 39 134 IPR002902 -
Accr11g00450 662 Pfam Salt stress response/antifungal 164 253 IPR002902 -
Accr11g00450 662 SUPERFAMILY Protein kinase-like (PK-like) 322 612 IPR011009 -
Accr11g00450 662 FunFam cysteine-rich receptor-like protein kinase 10 416 619 - -
Accr11g00450 662 Gene3D Transferase(Phosphotransferase) domain 1 416 618 - -
Accr11g00450 662 Gene3D - 31 136 IPR038408 -
Accr11g00450 662 Gene3D - 149 255 IPR038408 -
Accr11g00450 662 Gene3D Phosphorylase Kinase; domain 1 302 415 - -
Accr11g00450 662 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 301 415 - -
Accr11g00450 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Accr11g00450 662 ProSiteProfiles Protein kinase domain profile. 340 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00450 662 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 39 658 - -
Accr11g00450 662 ProSiteProfiles Gnk2-homologous domain profile. 33 138 IPR002902 -
Accr11g00450 662 MobiDBLite consensus disorder prediction 639 662 - -
Accr11g00450 662 ProSitePatterns Protein kinases ATP-binding region signature. 346 369 IPR017441 GO:0005524
Accr11g00450 662 Pfam Protein tyrosine and serine/threonine kinase 343 612 IPR001245 GO:0004672|GO:0006468
Accr11g00450 662 SMART serkin_6 340 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00450 Accr-Chr11 5746672 5749453 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00450 5 662 Receptor kinase-like Gene Family AT4G05200 43.358 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr11g00450 PK_Tyr_Ser-Thr 6.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00450 - - cam:101500396 705.671