Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00447 ATGGCTGGGGTTTCTCTTAGAATGCTTTCCTTCCTCTGTCTCCTTCCCATATTCATATCTCAAATCACTGCACAGCCTCAGTTCCTGTATCATTACTGTGACAATGCTAATGGCAACTACACTGCTAATAGTGCTTACCAGACCAACCTCAATACCCTTTTGTCCAATATTGCTTCCAACACAGAAATTGACTATGGCTTCTATAACTTCTCTTTTGGCCAAAACTCTGACAAGGTTAACGCTATAGGATTGTGCAGAGGAGATGTTGCCCCAGATTTATGCCGCAGTTGCCTCAGTGACTCTAAAACCCAACTCACCCAGCTCTGTCCAAATCAGATGGAGGCAATTGGGTTCTATGACAATTGCATGTTACGCTATTCAAACCGTTCAATATTTCACACCGTCGAAAATTTGCCTTCACTGTGCATGTGGAGCAATCATAATGCAACAGATGTGGATCAGTTCAATGGAGCGCTGAGGAGTTTGCTGGATGGTTTGAGGAGCAGGGCTTCATCAGGGAACTCTCTTCGTAAGTTTGAGGCAGCAAGTGCTGAAGGTCCAAACTTTCAGACTCTATTTGGTCTCGTGCAGTGTACACCTGATTTATCTTCAGTTCAGTGTGGTGACTGCTTGGTTCAGGCAATCTCAGATCTCCCAGGATGTTCTGGTGGCAAGATTGGTGGTAGAATCTTAAGACCAAGCTGTAACTTCAGATATGAAAACTATCGCTTCTACAACGCCACTGATGACTCAACGCCACCATCAGAAGGAAAGAGCAACACATCACGAACTATAATTGCCATAGTTGTGCCAATTGCTTCCGTTCTTGTCTTGCTCATCCTTGTCTGCATCTGTTTAAGAATGAGGAAATCGTGGAAATATATTGAAAATGATGACAATGAGGCTGACAATGAAATTAAGTCATCTGAGACATTGCAATTGAAGTATGACACCATCGTAGCAGCCACAAATAACTTTTCTGAAGAAAACAAGCTTGGACAAGGCGGATTTGGACCTGTTTATAAGGGTAAGCTGACTGAAGGACAAGAAATTGCTGTAAAAAGGTTGTCTGGGAATTCGTCCCAAGGGGATGCAGAATTTAAGAATGAAGTGCTTTTAGTAGCCAAGCTTCAACATCGAAATCTAGTTAGGCTACTTGGTTTTTGTTTGGAAAGGCAAGAAAGACTACTGGTCTATGAGTTTATTCCCCACAAAAGTCTTGACTACTTCATATTTGATCCAATTAAGTGTGCACAGTTATCTTGGGAAGAGCGATACAAAATCATAGGAGGCATTGCTAGAGGACTTCTTTACCTTCATGAAGATTCTCGTTTGCGAATTATTCATCGTGATCTTAAAGCAAGTAATATTCTGTTAGATGCAGAGATGAGTGCAAAAATATCAGATTTTGGCATGGCAAGATTAGTTGGAAGGGATCAAACTCAAGACAATACGAGCAGAGTTGTAGGGACATTTGGATATATGGCACCTGAATATGTATTACATGGACAATTCTCCGTGAAGACAGATGTTTATAGTTTTGGTGTACTAGTTCTGGAGATTGTAACTGGTCGTAAAAATAGCGAGATTTTCCATGGGGAGAATGCAGAGAATCTAGTCAGCTTTGCATGGAGAAACTGGAGGGAAGGAACAGCTACAAGAATTGTGGACCCCGCGGTTATGGGAGGTTCAAGAGATGAAATAATGAGATGCATCCACATAGGGTTGCTGTGTGTTCAAGATTATGTAGCTGACAGACCAACCATGGCTTCAGTTGAAGTCATGCTTAACAGCTACTCTGCCACCTTTCCCTTGCCTTCTCAACCTGCTTCCTACATGAATAGTATAAACTGGTCAGGCGAGTATACTTCAGGGTCAACAAGATCAAATGAACTTAAAAATGAATCTGATCAAGCATTGTCGAATAATGCATCGATGTCTCAGCCATTTCCTCGTTAG 1959 0.4186 MAGVSLRMLSFLCLLPIFISQITAQPQFLYHYCDNANGNYTANSAYQTNLNTLLSNIASNTEIDYGFYNFSFGQNSDKVNAIGLCRGDVAPDLCRSCLSDSKTQLTQLCPNQMEAIGFYDNCMLRYSNRSIFHTVENLPSLCMWSNHNATDVDQFNGALRSLLDGLRSRASSGNSLRKFEAASAEGPNFQTLFGLVQCTPDLSSVQCGDCLVQAISDLPGCSGGKIGGRILRPSCNFRYENYRFYNATDDSTPPSEGKSNTSRTIIAIVVPIASVLVLLILVCICLRMRKSWKYIENDDNEADNEIKSSETLQLKYDTIVAATNNFSEENKLGQGGFGPVYKGKLTEGQEIAVKRLSGNSSQGDAEFKNEVLLVAKLQHRNLVRLLGFCLERQERLLVYEFIPHKSLDYFIFDPIKCAQLSWEERYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDAEMSAKISDFGMARLVGRDQTQDNTSRVVGTFGYMAPEYVLHGQFSVKTDVYSFGVLVLEIVTGRKNSEIFHGENAENLVSFAWRNWREGTATRIVDPAVMGGSRDEIMRCIHIGLLCVQDYVADRPTMASVEVMLNSYSATFPLPSQPASYMNSINWSGEYTSGSTRSNELKNESDQALSNNASMSQPFPR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00447 652 SMART serkin_6 326 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00447 652 Pfam Protein tyrosine and serine/threonine kinase 329 530 IPR001245 GO:0004672|GO:0006468
Accr11g00447 652 Gene3D - 25 130 IPR038408 -
Accr11g00447 652 Gene3D - 139 244 IPR038408 -
Accr11g00447 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Accr11g00447 652 Gene3D Transferase(Phosphotransferase) domain 1 402 604 - -
Accr11g00447 652 CDD STKc_IRAK 332 597 - -
Accr11g00447 652 Pfam Salt stress response/antifungal 142 242 IPR002902 -
Accr11g00447 652 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Accr11g00447 652 ProSiteProfiles Protein kinase domain profile. 326 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00447 652 MobiDBLite consensus disorder prediction 623 652 - -
Accr11g00447 652 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 131 - -
Accr11g00447 652 FunFam Cysteine-rich receptor-like protein kinase 28 402 604 - -
Accr11g00447 652 FunFam Cysteine-rich receptor-like protein kinase 10 139 244 - -
Accr11g00447 652 SUPERFAMILY Protein kinase-like (PK-like) 308 596 IPR011009 -
Accr11g00447 652 ProSiteProfiles Gnk2-homologous domain profile. 137 244 IPR002902 -
Accr11g00447 652 FunFam Cysteine-rich receptor-like protein kinase 10 288 401 - -
Accr11g00447 652 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 642 - -
Accr11g00447 652 Gene3D Phosphorylase Kinase; domain 1 287 401 - -
Accr11g00447 652 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00447 Accr-Chr11 5714035 5717681 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00447 22 615 Receptor kinase-like Gene Family AT4G38830 51.535 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr11g00447 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00447 - - lang:109353867 880.167