Gene search

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00442 233 PRINTS MADS domain signature 15 35 IPR002100 GO:0003677|GO:0046983
Accr11g00442 233 PRINTS MADS domain signature 35 50 IPR002100 GO:0003677|GO:0046983
Accr11g00442 233 PRINTS MADS domain signature 50 71 IPR002100 GO:0003677|GO:0046983
Accr11g00442 233 Gene3D - 26 91 IPR036879 GO:0003677|GO:0046983
Accr11g00442 233 SUPERFAMILY SRF-like 14 85 IPR036879 GO:0003677|GO:0046983
Accr11g00442 233 CDD MADS_MEF2_like 18 88 IPR033896 GO:0000977|GO:0045944
Accr11g00442 233 Coils Coil 103 133 - -
Accr11g00442 233 PANTHER MADS BOX PROTEIN 15 171 - -
Accr11g00442 233 ProSiteProfiles MADS-box domain profile. 13 73 IPR002100 GO:0003677|GO:0046983
Accr11g00442 233 SMART madsneu2 13 72 IPR002100 GO:0003677|GO:0046983
Accr11g00442 233 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 23 69 IPR002100 GO:0003677|GO:0046983
Accr11g00442 233 FunFam Agamous-like MADS-box protein AGL62 25 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00442 Accr-Chr11 5662540 5663241 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00442 12 203 Type I MADS-box Gene Family AT2G24840 40.291 2.73e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Accr11g00442 SRF-TF 9.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00442 - - pcin:129286086 300.441