Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00432 ATGTCTCCGTTATTGTTTTGGTGTTTGCTCCTTGTTCTGTTTCTCTCCAACTCTGTTTCTTCTCAAACCATCGTCAAGACCTTGCCTGGTTTTGAAGGGGAGCTTCCTTTCTCACTTGAAACAGGGTACCTTGGGGTTGGGGAATATGATGAGATTCAGCTGTTTTATTACTTCTTTAAATCGGAGAGGATACCAAATGACGACCCTCTTGTGCTCTGGCTTCCAACTGGCCCTGGTTGCTCTGTTCTCTCTTCCATCTTGTACGAGAATGGTCCAATTCGTTTCAATTACAAGAATTCAAGCATCCAAGATAAACCAGTTTTAGAGACAACTATGTACTCTTGGACTAAGGTTGCCAATGTACTTTACCTGGATGCACCAGTTGGCACTGGGTTTTCTTACTCAATACTTCCCTCAGAATACAACACCAGTGACACAAAAACTGTCTCAAACATTTATGAGTTTCTCAGAAAGTGGCTCCTATTGCATCCTGAGTATTCTGAACATCAACTAGTAATTGGTGGAGAATCTTATTCTGGCATCATTGTTCCAGCTCTTGCCCAGAAAATAATAGAGGGTAATGCAGATAAAAGATATCCTGGAATGAATCTCCAAACTTTGGTTGTGGGAAACCCCTTCACTGATGTGCATTACGATATAAATTCAAGAGTTGAGTATGCTTACAGAGTTGCACTTATATCTGAAGATATCTTTGAGCATGCTGAATTTCAATGCCATAGAGAATACGTGCACCCCAACAAAAGTAATACCGGTTGTATTGAGGATCTCGTATTGATACATGAGTGCTTGGTAGACCTGAATGCTGCCATGATTCTGGAAAATAAGTGTGCTTCTTTCTCTCCAAGACCAAAGAACCTCCAGTGGGATTTAGGCTCTCTTGGACTTAATCTTACTGATTCCCTCTTCTCAGAGGCCAATCCCATTACTTCCACCAGTTTTTGCAGGAACTATGACTATTTGTTTGCCTCCCTGTGGGCAAATGATCCAGAAGTACAGGAAGCTCTGAATGTTAGAAATGGAAGTATAGAACATTGGGAGAGATGCAATAAGAGCATAACTTACACTCGTGACATAAAAAGTAGCCTTCAGTATTACAAGAACTTCTTCAGTGCAAAGCTTCTTAGGGTGCTGGTTTACAGTGGAGATCATGATCTGATCATCCCACATGTGGGAACAGAGAAATGGATTGCAAGTTTGAACATGACTGTGGCTGCTGATGATGAGTGGAGGCCTTGGTATGTTGATGGCCAGGTTGCAGGATACACAGAGATATACAGGCATGACAAGTTCAGTATAACATATGCAACGGTCAAGGGAGCAGGTCACACAGCTCCAGAGTACAAGCCAAAGGAGTGCTATAACATGATTAGGAGGTATCTTGCTTATTTCTTCCTTTAA 1419 0.4179 MSPLLFWCLLLVLFLSNSVSSQTIVKTLPGFEGELPFSLETGYLGVGEYDEIQLFYYFFKSERIPNDDPLVLWLPTGPGCSVLSSILYENGPIRFNYKNSSIQDKPVLETTMYSWTKVANVLYLDAPVGTGFSYSILPSEYNTSDTKTVSNIYEFLRKWLLLHPEYSEHQLVIGGESYSGIIVPALAQKIIEGNADKRYPGMNLQTLVVGNPFTDVHYDINSRVEYAYRVALISEDIFEHAEFQCHREYVHPNKSNTGCIEDLVLIHECLVDLNAAMILENKCASFSPRPKNLQWDLGSLGLNLTDSLFSEANPITSTSFCRNYDYLFASLWANDPEVQEALNVRNGSIEHWERCNKSITYTRDIKSSLQYYKNFFSAKLLRVLVYSGDHDLIIPHVGTEKWIASLNMTVAADDEWRPWYVDGQVAGYTEIYRHDKFSITYATVKGAGHTAPEYKPKECYNMIRRYLAYFFL 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00432 472 Gene3D alpha/beta hydrolase 18 291 IPR029058 -
Accr11g00432 472 FunFam Carboxypeptidase 319 470 - -
Accr11g00432 472 Gene3D - 320 470 - -
Accr11g00432 472 ProSitePatterns Serine carboxypeptidases, histidine active site. 439 456 IPR033124 GO:0004185
Accr11g00432 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 24 456 IPR001563 GO:0004185|GO:0006508
Accr11g00432 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Accr11g00432 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 439 452 IPR001563 GO:0004185|GO:0006508
Accr11g00432 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Accr11g00432 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Accr11g00432 472 FunFam Serine carboxypeptidase-like 19 18 289 - -
Accr11g00432 472 Pfam Serine carboxypeptidase 29 467 IPR001563 GO:0004185|GO:0006508
Accr11g00432 472 SUPERFAMILY alpha/beta-Hydrolases 25 468 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00432 Accr-Chr11 5525558 5531095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00432 19 49 Calmodulin-binding Proteins AT2G22960 64.516 1.14e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00432 K16296 - jre:108983123 511.146