Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00426 ATGTTTCGCTCCCCGGCCGACGCTTTTGCCGCCGGTGACTTGCTATGCGGCGAGGATGCCGATGAAGTGATCTCCGGCGAAAACCACCCGGCGCCGTTGTCGTTGTATCTTCCATCGTATTCACCGCCTTCCGACGACGCAACCATCGGCAGACTCATCGACGTCGAGGCACATCATATGCCCGACCCAGATTACTTGCGGCGGTGCCGTTATCGTTTAATCGACGTAACCGCTCGCCAAGACTCCATCAACTGGATCTTGAAGGTTCACGCACATTACGAGTTTCGTCCGGTAACGGCGTTCCTCTCAGTCAACTACCTCGATCGTTTTCTTTCTTGCTCTCCACTTCCGCGGCAAATTCAGTGGGAGTATCATCTGATATCAGTGGCATGCTTATCGTTAGCGGCGAAAATGGAGGAACCTGAAGTGCCTCTGTTACTGGACCTTCAATTAGTGGATCCCAGATTTGTATTCGAACCCAAGACGATTCAAAGAATGGAGCTGTGTGTCATGACCAACCTACGCTGGAGATTATGCTCCATAACGCCTTTTGATTATCTCCATTACTTCATCTCTAAGCTCTCTTCCTCCTCCGATCGGCAACCCGAATCCATAACCCGGTTCATCTCGACTGCTTCCAATATCATCCTCGGCACTACCCTTGTGATTGATTTCTTGGGTTTTGCGCCGTCGACCTTAGCGGCTGCCGCCGTTCTCTGCTCCACTGGCAAGGGCCAATCGCCAGCATCCTTTCATGATGGAGTAAACAAAGAAATGGCGAGAAGCTGTCACCAACTAATGGAGGATTATGTGGTGGACACGTGTCCCTTTGCTGGCTGTAAATCCCCTGGAGCCGAGACGGAGCAGGAGCCGCCTTCGAGTCCAGTAGGCGTGCTCGACGCCGCTAGTTCATGTGCCAGCTGCGAAACTCGATCTGAGCAGCCAGCGTCAACCAGCGAAGCCGAGCCAGCTGCCCAACAATCGGGCACGATCCCCTGA 999 0.5345 MFRSPADAFAAGDLLCGEDADEVISGENHPAPLSLYLPSYSPPSDDATIGRLIDVEAHHMPDPDYLRRCRYRLIDVTARQDSINWILKVHAHYEFRPVTAFLSVNYLDRFLSCSPLPRQIQWEYHLISVACLSLAAKMEEPEVPLLLDLQLVDPRFVFEPKTIQRMELCVMTNLRWRLCSITPFDYLHYFISKLSSSSDRQPESITRFISTASNIILGTTLVIDFLGFAPSTLAAAAVLCSTGKGQSPASFHDGVNKEMARSCHQLMEDYVVDTCPFAGCKSPGAETEQEPPSSPVGVLDAASSCASCETRSEQPASTSEAEPAAQQSGTIP 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00426 332 CDD CYCLIN_AtCycD-like_rpt2 181 267 - -
Accr11g00426 332 PANTHER CYCLINS 53 271 IPR039361 -
Accr11g00426 332 Gene3D - 62 179 - -
Accr11g00426 332 SUPERFAMILY Cyclin-like 45 178 IPR036915 -
Accr11g00426 332 FunFam D2/4-type cyclin 62 177 - -
Accr11g00426 332 MobiDBLite consensus disorder prediction 305 332 - -
Accr11g00426 332 SMART cyclin_7 84 172 IPR013763 -
Accr11g00426 332 Pfam Cyclin, N-terminal domain 52 179 IPR006671 -
Accr11g00426 332 CDD CYCLIN_AtCycD-like_rpt1 78 176 - -
Accr11g00426 332 Pfam Cyclin, C-terminal domain 181 271 IPR004367 -
Accr11g00426 332 SMART Cyclin_C_2 181 307 IPR004367 -
Accr11g00426 332 Gene3D - 51 246 - -
Accr11g00426 332 MobiDBLite consensus disorder prediction 282 332 - -
Accr11g00426 332 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
Accr11g00426 332 FunFam D6-type cyclin 178 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00426 Accr-Chr11 5475431 5476997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00426 13 274 Core Cell Cycle Gene Families AT1G70210 43.015 4.03e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00426 K18810 - qsa:O6P43_031142 377.481