Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00411 ATGCAAAAGATTGAAGAGGATTTGGGAGGTCGTGAAATCAACATGGTGATACAGAAGAAGATTTGCAGATGTGATTTCAGTTTCCATGCCTTCTCAATTCCAGAAAACGAAATCTTGGAGGATGCCAGAGATTTTCTGAAACCTCATGAGGTTGAGTTTTTGAAAATGACTTCAAGTCGAAGTATATCTGTGTCGCTGTTTGATCATAATCTTCAACAATTCTACATGTTTCTGAGTTGGTGGCAAAAGAATAATATTTCCTTTTATGATCTAAGTTATTGTTGGAAAGAGGTGGTGCAACCTAATAATTTGAAGCTGGATGATGTGGTGCAACTATGGTCTTTTAGAAGGGATCATGATCTTGGATTTGCATTAGTCAAGCTTACTCGATAA 393 0.369 MQKIEEDLGGREINMVIQKKICRCDFSFHAFSIPENEILEDARDFLKPHEVEFLKMTSSRSISVSLFDHNLQQFYMFLSWWQKNNISFYDLSYCWKEVVQPNNLKLDDVVQLWSFRRDHDLGFALVKLTR 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00411 130 Gene3D - 1 129 IPR015300 -
Accr11g00411 130 SUPERFAMILY DNA-binding pseudobarrel domain 17 121 IPR015300 -
Accr11g00411 130 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 4 128 IPR005508 GO:0003677
Accr11g00411 130 Pfam B3 domain-containing protein At2g31720-like 9 100 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00411 Accr-Chr11 5326845 5327237 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00411 1 125 B3 DNA Binding Superfamily AT1G05930 28.788 2.46e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00411 - - pcin:129322468 117.087