Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00398 ATGAGTTGCAACGGTTGTCGTGTGCTTAGAAAAGGTTGCAGCGATAACTGCGTGCTCCGAGATTGCCTTGTGGGCATAGAAAGCCCACAAGCTCAAGCTCACGCCACCGTCTTCGTCGCCAAATTCTTCGGCCGTGCCGCTTTCATGTCCTTCGTCTCCGCCGTACCTGCCCACCAGAGACCCGCTTTGTTCCGATCGCTTTTGTACGAAGCAGTGGGACGTACCATAAATCCGGTAAACGGTGCAGTGGGCCTGCTCTGGGCCGGCAATTGGCATCTTTGTCAATTAGGAGTACAGAGAGTGCTCTGCGGTGAAGCTTTGACTCCACTCCCCGACGTCTCCGGCAGAACCTCCGTAACAACTGCGGCCGAGGACGACGGCTTTGGACCTATTCTAGATTTTTCTAGGCAGCGAGACAATATGATGGTGGGATCGGGGCCAAGGAACCTAAAGAGAAAGGTCCCTAGTTACGACTTGGTCTTGAAGAATACGAATGTCCAAGCACATGATCATGATCAGTACTGCTTGCGGGGATCAGGTTCGACGGAGAGAGAGGTGGTGGTTGACGGTGGCGGCGGAAGGATTTATGAAGGGAGAGCGGGGACGCCTTCAGAGGGATCTGAAACGTCGTCGTTAGGAAGTAGCGATGCGCTGTGTGGCGGTGCTGAGAGGAAGCTCCTAAGGCTTTTCTTCTAA 696 0.5402 MSCNGCRVLRKGCSDNCVLRDCLVGIESPQAQAHATVFVAKFFGRAAFMSFVSAVPAHQRPALFRSLLYEAVGRTINPVNGAVGLLWAGNWHLCQLGVQRVLCGEALTPLPDVSGRTSVTTAAEDDGFGPILDFSRQRDNMMVGSGPRNLKRKVPSYDLVLKNTNVQAHDHDQYCLRGSGSTEREVVVDGGGGRIYEGRAGTPSEGSETSSLGSSDALCGGAERKLLRLFF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00398 231 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Accr11g00398 231 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Accr11g00398 231 MobiDBLite consensus disorder prediction 192 216 - -
Accr11g00398 231 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00398 Accr-Chr11 5071371 5072409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00398 1 113 AS2 family AT3G49940 72.566 1.77e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr11g00398 LOB 9.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00398 - - pcin:129284755 295.819