Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00390 ATGATGATTCGTTTGTGCTACAGACCGCTGGAGCGTTGCTTTGGACGGCTAGGATGCGGCGGCGGCGGTACCGGTGGCGATGGCCTTCTTTGGCACTCTGACTTGAAGCCTCATGCCTCTGGCCACTTCTCCATAGCCGTCGTTCAGGCCAATTACAGTCTCGAAGATCAGGGTCAAGTCTTCACATCTCCCTCCGCCACCTACATCGGCGTCTATGATGGCCATGGCGGGCCTGAGGCTTCTAGATTTGTCAACAAACGCCTCTTCCCTCATTTGCAGAAGTTTGCTTCCGAACAAGGAGGATTGTCCGCGGATGTGATTAAAAAGGCGTTTAAGGCCACCGAGGATGAGTTTTTGCATTTGGTGAAGCGAACATTGCCTATAAGTCCTCAAATTGCTTCGGTAGGATCATGCTGCCTTCTTGGTGCAATTTCTGATAATTTACTGTATGTTGCAAACCTTGGGGATTCTCGAGCTGTTCTTGGCCGCCGAGATACTGAGAGGAAAAAATACCCAGTGGTGGCAGAACGGCTATCCACGGATCATAATGTGGCTGTCGAGGAGGTGAGGAAGGAGGTGGAAGCCCTCCACCCTGATGACTCACACATTGTGGTTTTAAGCCGTGGAGTTTGGAGGATTAAAGGCATAATACAGGTCTCGAGATCTATTGGTGATGTGTATCTCAAGAGACCTGACTTTTACAGAGATCCAGTTTTTCAGCAATTTGGAAACCCAGTTCCTTTGAAGCGTCCTGTAATGACAGCTGAACCATCAATCCTTATTAGGGAGCTTGAGCCGGAAGATTTATTCTTGATATTTGCATCAGATGGCCTTTGGGAACAATTAAGTGATCAAGCCGCAGTTGAGATTGTTTTTAAGCATCCAAGAGCTGAAATCGCCAAGAGATTGGTGAGAGCTGCTGTACAGGAAGCTGCAAAGAAGAGAGAGATGAGATATGATGATATAAAGAAAATTGACAAGGGAATAAGAAGACATTTCCATGACGATATCACTGTCATCGTTATATATCTTGACAACCAGAAAGGTTCTCCTTATGATAGATCTAAACCAAATGCTGTTGGCTGCACTAGTGCCCCTGTGGATATTTTCTCCCTCAATGCAGGAGATGAATCAGAACGGAGCATGCTCAGTTCAGTTGCTTAA 1164 0.4665 MMIRLCYRPLERCFGRLGCGGGGTGGDGLLWHSDLKPHASGHFSIAVVQANYSLEDQGQVFTSPSATYIGVYDGHGGPEASRFVNKRLFPHLQKFASEQGGLSADVIKKAFKATEDEFLHLVKRTLPISPQIASVGSCCLLGAISDNLLYVANLGDSRAVLGRRDTERKKYPVVAERLSTDHNVAVEEVRKEVEALHPDDSHIVVLSRGVWRIKGIIQVSRSIGDVYLKRPDFYRDPVFQQFGNPVPLKRPVMTAEPSILIRELEPEDLFLIFASDGLWEQLSDQAAVEIVFKHPRAEIAKRLVRAAVQEAAKKREMRYDDIKKIDKGIRRHFHDDITVIVIYLDNQKGSPYDRSKPNAVGCTSAPVDIFSLNAGDESERSMLSSVA 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00390 387 ProSiteProfiles PPM-type phosphatase domain profile. 42 344 IPR001932 -
Accr11g00390 387 SMART PP2C_4 32 342 IPR001932 -
Accr11g00390 387 CDD PP2Cc 55 344 IPR001932 -
Accr11g00390 387 FunFam Probable protein phosphatase 2C 42 33 351 - -
Accr11g00390 387 Gene3D - 33 351 IPR036457 -
Accr11g00390 387 ProSitePatterns PPM-type phosphatase domain signature. 68 76 IPR000222 GO:0043169
Accr11g00390 387 PANTHER PROTEIN PHOSPHATASE 41 342 IPR015655 GO:0004722|GO:0006470
Accr11g00390 387 Pfam Protein phosphatase 2C 64 313 IPR001932 -
Accr11g00390 387 SMART PP2C_SIG_2 44 344 IPR001932 -
Accr11g00390 387 SUPERFAMILY PP2C-like 48 346 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00390 Accr-Chr11 5004724 5007133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00390 27 350 PP2C-type Phosphatase Gene Family AT3G51370 58.133 2.80e-144 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00390 - K01102 rcu:8272244 611.298