Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00383 ATGATCATTCAGGGAGATGAAAGAACTTTCATAACAACCAAAGAACAAGCAAGTGAAAATGAAGATCCTGAAGAGTGGTTAAAGCTGAACCTGAGATTAGGAGGCAAAACACTCACTACTACAGATTCTCAATCATCAAAATCAGCAACCACAAAAGTTTTCTCCTGCAACTTCTGCATGAGGAAGTTCTTCAGTTCACAAGCATTAGGGGGTCATCAGAACGCACACAAAAGAGAAAGAGGAGCAGCAAGGAGATACCCATCTCAAAAGTTGATGATGACCCCGATGGGATCATCATCCATCAACTTGGCATTATTTCATCGAACCCTTGGCGTGCAGCCCCATTCACTCGTACACAAGCCATCATCAAGCTGGAATGGAACTACAATAACGGCATCAAGCTTTCAAGAATATGCAATGGCATGGGCTTCACCTTTCATGGGTGAGGATCAAAAGGATTTGGTGTGGCCAGGAAGCTTTCGTTTAGATCCACCAGAGCAAGCCAACGAGGCACCACAAGAATCGCTCAAGCTTGATTTAGAGCTCAGACTCTGA 555 0.4414 MIIQGDERTFITTKEQASENEDPEEWLKLNLRLGGKTLTTTDSQSSKSATTKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYPSQKLMMTPMGSSSINLALFHRTLGVQPHSLVHKPSSSWNGTTITASSFQEYAMAWASPFMGEDQKDLVWPGSFRLDPPEQANEAPQESLKLDLELRL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00383 184 SUPERFAMILY beta-beta-alpha zinc fingers 51 80 IPR036236 -
Accr11g00383 184 ProSitePatterns Zinc finger C2H2 type domain signature. 56 76 IPR013087 -
Accr11g00383 184 PANTHER ZINC FINGER PROTEIN 4-LIKE 7 184 - -
Accr11g00383 184 ProSiteProfiles Zinc finger C2H2 type domain profile. 54 81 IPR013087 -
Accr11g00383 184 Gene3D Classic Zinc Finger 35 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00383 Accr-Chr11 4913318 4913872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00383 48 180 C2H2 Transcription Factor Family AT1G66140 38.037 1.65e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00383 - - gmx:100811125 177.178