Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00367 ATGAATACAGATTCGGCAACAATGGAGGCGCAGCAGAGAGAAGTGGATCGGGTCAAGGGACCATGGAGTCCTGAGGAGGATGAGTTGTTACACAAGCTCGTGCAACACCACGGTCCAAGGAACTGGTCCACCATAAGCAAATCAATACCCGGTAGGTCCGGCAAGTCTTGTCGTCTGCGGTGGTGTAACCAGCTCTCGCCGGACGTGGAGCACCGATCCTTTACACCGGAGGAAGACGAGATCATCGTCAAGGCCCACTCAAAGTTCGGCAACAAATGGGCCACCATAGCTAGGCTCCTGAATGGCCGTACGGACAACGCGATTAAAAACCACTGGAACTCGACCTTGAAGCGCAAGTTCTCTTCGTTGGTCGACGGAGAAGGCACCGCAAACGACGGGCCTCCGGAAAAGAAACCGTTCATCGTGGAACGCGCTGTGCCGATACAGTCATTGCCGCCTGGCGTCCATTGTTACAGCCCTAGCAGTCCATCAGGATCTGATGTTAGTGATTCTGGTCTTCCTGTGGTTTCATCTTCAATGGCGATTTGTACTGTACCGAGAAAATGCCCGAGTCCAATCTTCAACTTAAACAAAGAGCCCTGCACTGATCTTGGTCTGTACACTGGACCCGACTTGAAGGAGTCTCAGAAGATTGCGATCCCGGGTCCTCCTGGTTTTAGGGCCAAGCCACAAACGCAGTCTGAGAAGTTATCATCAATGTCTACATTTGGGCCTGATTTACTCATGGTGATGAAGGAAATGATAAAGGAAGAAGTGAGAAATTACATGGAGGGACATAATGATAGATTGTGCTCCAATCCGGACGGTGAGAGTGCTGGAATTTCAAAGTTAAATCGAGCAGAGTGA 867 0.5052 MNTDSATMEAQQREVDRVKGPWSPEEDELLHKLVQHHGPRNWSTISKSIPGRSGKSCRLRWCNQLSPDVEHRSFTPEEDEIIVKAHSKFGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSLVDGEGTANDGPPEKKPFIVERAVPIQSLPPGVHCYSPSSPSGSDVSDSGLPVVSSSMAICTVPRKCPSPIFNLNKEPCTDLGLYTGPDLKESQKIAIPGPPGFRAKPQTQSEKLSSMSTFGPDLLMVMKEMIKEEVRNYMEGHNDRLCSNPDGESAGISKLNRAE 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00367 288 CDD SANT 73 116 IPR001005 -
Accr11g00367 288 Gene3D - 18 70 - -
Accr11g00367 288 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Accr11g00367 288 MobiDBLite consensus disorder prediction 1 22 - -
Accr11g00367 288 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Accr11g00367 288 ProSiteProfiles Myb-like domain profile. 14 65 IPR001005 -
Accr11g00367 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 69 IPR017930 -
Accr11g00367 288 FunFam Transcription factor MYB44 73 119 - -
Accr11g00367 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 120 IPR017930 -
Accr11g00367 288 Pfam Myb-like DNA-binding domain 73 115 IPR001005 -
Accr11g00367 288 Pfam Myb-like DNA-binding domain 19 65 IPR001005 -
Accr11g00367 288 Gene3D - 73 119 - -
Accr11g00367 288 PANTHER MYB PROTEIN-RELATED 19 213 - -
Accr11g00367 288 MobiDBLite consensus disorder prediction 266 288 - -
Accr11g00367 288 SMART sant 18 67 IPR001005 -
Accr11g00367 288 SMART sant 70 118 IPR001005 -
Accr11g00367 288 MobiDBLite consensus disorder prediction 220 239 - -
Accr11g00367 288 CDD SANT 21 63 IPR001005 -
Accr11g00367 288 FunFam MYB transcription factor 19 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00367 Accr-Chr11 4752260 4753126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00367 10 263 MYB Transcription Factor Family AT2G23290 51.449 7.12e-72 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr11g00367 Myb_DNA-binding 2.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00367 K09422 - qsa:O6P43_031073 270.396