Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00366 ATGATTTACGCGATGAATACAGATTCGGCAACAATGGAGGCGCAGCAGAGAGAAGTGGATCGGGTCAAGGGACCATGGAGTCCTGAGGAGGATGAGTTGTTACACAAGCTCGTGCAACACCACGGTCCAAGGAACTGGTCCACCATAAGCAAATCAATACCCGGTAGGTCCGGCAAGTCTTGTCGTCTGCGGTGGTGTAACCAGCTCTCGCCGGACGTGGAGCACCGATCCTTTACACCGGAGGAAGACGAGATCATCGTCAAGGCCCACTCAAAGTTCGGCAACAAATGGGCCACCATAGCTAGGCTCCTGAATGGCCGTACGGACAACGCGATTAAAAACCACTGGAACTCGACCTTGAAGCGCAAGTTCTCTTCGTTGGTCGACGGAGAAGGCACCGCAAACGACGGGCCTCCGGAAAAGAAACCGTTCATCGTGGAACGCGCTGTGCCGATACAGTCATTGCCGCCTGGCGTCCATTGTTACAGCCCTAGCAGTCCATCAGGATCTGATGTTAGTGATTCTGGTCTTCCTGTGGTTTCATCTTCAATGGCGATTTGTACTGTACCGAGAAAATGCCCGAGTCCAATCTTCAACTTAAACAAAGAGCCCTGCACTGATCTTGGTCTGTACACTGGACCCGACTTGAAGGAGTCTCAGAAGATTGCGATCCCGGGTCCTCCTGGTTTTAGGGCCAAGCCACAAACGCAGTCTGAGAAGTTATCATCAATGTCTACATTTGGGCCTGATTTACTCATGGTGATGAAGGAAATGATAAAGGAAGAAGTGAGAAATTACATGGAGGGACATAATGATAGATTGTGCTCCAATCCGGACGGTGAGAGTGCTGGAATTTCAAAGTTAAATCGAGCAGAGTGA 879 0.504 MIYAMNTDSATMEAQQREVDRVKGPWSPEEDELLHKLVQHHGPRNWSTISKSIPGRSGKSCRLRWCNQLSPDVEHRSFTPEEDEIIVKAHSKFGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSLVDGEGTANDGPPEKKPFIVERAVPIQSLPPGVHCYSPSSPSGSDVSDSGLPVVSSSMAICTVPRKCPSPIFNLNKEPCTDLGLYTGPDLKESQKIAIPGPPGFRAKPQTQSEKLSSMSTFGPDLLMVMKEMIKEEVRNYMEGHNDRLCSNPDGESAGISKLNRAE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00366 292 CDD SANT 77 120 IPR001005 -
Accr11g00366 292 Pfam Myb-like DNA-binding domain 23 69 IPR001005 -
Accr11g00366 292 Pfam Myb-like DNA-binding domain 77 119 IPR001005 -
Accr11g00366 292 PANTHER MYB PROTEIN-RELATED 23 217 - -
Accr11g00366 292 MobiDBLite consensus disorder prediction 1 24 - -
Accr11g00366 292 MobiDBLite consensus disorder prediction 270 292 - -
Accr11g00366 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 124 IPR017930 -
Accr11g00366 292 MobiDBLite consensus disorder prediction 224 243 - -
Accr11g00366 292 FunFam MYB transcription factor 23 74 - -
Accr11g00366 292 CDD SANT 25 67 IPR001005 -
Accr11g00366 292 Gene3D - 22 74 - -
Accr11g00366 292 FunFam Transcription factor MYB44 77 123 - -
Accr11g00366 292 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Accr11g00366 292 SMART sant 74 122 IPR001005 -
Accr11g00366 292 SMART sant 22 71 IPR001005 -
Accr11g00366 292 SUPERFAMILY Homeodomain-like 20 116 IPR009057 -
Accr11g00366 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 73 IPR017930 -
Accr11g00366 292 Gene3D - 77 123 - -
Accr11g00366 292 ProSiteProfiles Myb-like domain profile. 18 69 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00366 Accr-Chr11 4752248 4753126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00366 14 267 MYB Transcription Factor Family AT2G23290 51.449 8.16e-72 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr11g00366 Myb_DNA-binding 2.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00366 K09422 - qsa:O6P43_031073 270.396