Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00354 ATGGCAATCCTCCACCATCGCAATGACCAACTAGCTCACCACGAGAACTCTTCCTCTTTCCTTGATTCTCTTTACTGCGATGAAGAAAAATGGGAAGAAGAAGTAGAACAAGTGGAAGGTATTAATAATGATGAGACTGGTCTTCTTCTTCTTCCTCGGATCTTGTCAGAGCAGGACTTGTTCTGGGAAGATGAAGAGCTGAACTCTCTGTTCTCCAAAGAAGAAGAAGCTTGTTGCTTTGATATGTGTGTTGGTCTTGCTCTGGCTCGTCGTGAGGCAATAGAATGGATGCTTAAAGTGAAAGCCCATTATGGCTTCTCTGCTTTAACGGCAATACTAGCCATTAATTATCTGGATAGATTCCTCTCGAGCTTCCATTTTCAAAGGGAGAAGCCATGGATGATTCAGCTTGTGGCTGTCACTTGCCTCTCTCTAGCAGCAAAAGTTGAAGAAACTCATGTCCCTCTTCTTCTAGACCTCCAAGTTGAAGATACTAAGTTCATGTTTGAGGCAAAGACTATACAGAGAATGGAGCTGCTTGTTCTATCAGCCCTGAAATGGAAGATGCACCCAGTAACACCAATCTCTTTTCTGGATCACATCATAAGGAGGCTTGGATTGAAAACCCATCTTCACTGGGAATTCCTCAGGCGCTGCGAGCATCTCCTCCTCTCTGTTCTTCCAGATTCAAGATTTGTGGGTTATCTCCCATCGGTGTTGGCTACTGCAATAATGCTGCATGTGGTAGACCAGATTGAGCAGCAGAGTGAAGCAGTGGAATATAAAAATCAGCTTCTGGGCGTTCTTAAAAGCAACAAGGAAAAAGTAGATGAGTGCTATAGTGCAATACAGGAGCTGTGGAATTATTATTATTATGGGCAAGACAAAAGTACTAAAAAACGAAGATATGATGAAATTATAAATCCTGGGAGCCCAAGTGGAGTAATAGACGCGGTGTTTGGGTCTGACGGTTCCAACGATTCGTGGGAAGTGGGGTCATCATTATGTTCATCACCAGAGCCACTGTTGAAGAAGACCAGACCCCAAGAACAACAAATGACTCTGTCTCCTCCGTTCCATCGGGTCATTGTCGGAATCGTTGGCGCCTCTCCTTGA 1116 0.4418 MAILHHRNDQLAHHENSSSFLDSLYCDEEKWEEEVEQVEGINNDETGLLLLPRILSEQDLFWEDEELNSLFSKEEEACCFDMCVGLALARREAIEWMLKVKAHYGFSALTAILAINYLDRFLSSFHFQREKPWMIQLVAVTCLSLAAKVEETHVPLLLDLQVEDTKFMFEAKTIQRMELLVLSALKWKMHPVTPISFLDHIIRRLGLKTHLHWEFLRRCEHLLLSVLPDSRFVGYLPSVLATAIMLHVVDQIEQQSEAVEYKNQLLGVLKSNKEKVDECYSAIQELWNYYYYGQDKSTKKRRYDEIINPGSPSGVIDAVFGSDGSNDSWEVGSSLCSSPEPLLKKTRPQEQQMTLSPPFHRVIVGIVGASP 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00354 371 Gene3D - 89 190 - -
Accr11g00354 371 CDD CYCLIN_AtCycD-like_rpt1 89 187 - -
Accr11g00354 371 PANTHER CYCLINS 65 285 IPR039361 -
Accr11g00354 371 CDD CYCLIN_AtCycD-like_rpt2 192 280 - -
Accr11g00354 371 Gene3D - 191 282 - -
Accr11g00354 371 SUPERFAMILY Cyclin-like 61 190 IPR036915 -
Accr11g00354 371 SMART cyclin_7 95 183 IPR013763 -
Accr11g00354 371 FunFam D3-type cyclin 84 190 - -
Accr11g00354 371 Pfam Cyclin, C-terminal domain 192 289 IPR004367 -
Accr11g00354 371 SUPERFAMILY Cyclin-like 193 288 IPR036915 -
Accr11g00354 371 SMART Cyclin_C_2 192 313 IPR004367 -
Accr11g00354 371 Pfam Cyclin, N-terminal domain 89 189 IPR006671 -
Accr11g00354 371 FunFam CYCLIN D32 191 281 - -
Accr11g00354 371 ProSitePatterns Cyclins signature. 90 121 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00354 Accr-Chr11 4605431 4606904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00354 1 286 Core Cell Cycle Gene Families AT4G34160 58.824 4.54e-113 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00354 K14505 - gmx:547740 499.59