Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00352 ATGGGTAATATCTCTGTGTGTGTTCTATCGTTGTTGATGTTTGCTAGTTCTTTCCTCACTCGTTCTTCATATTCTCATGAGCTGACCCCCTCCAAAAGAGAAGCTTTAGAAATTATCATCGGCGTCACCGGCAATGCTCCTTCTTCCTCCCCAGAATGTGGAGAATGTGAATCCCCTCCGCCGCCTCCTCCGCCTTCATGCGAGCCTCCTCCTCCACCGCCACCATGCCCTCCCCCTCCTTCACCACCTCCCCCGCCCCCTCCACCACCTCCTCCCCCGCCGCCACCGCCACCTCGGCCGCCGCAAGAGGGACGGAGGCTAAAGCAAGCGAAAAATGTGCTTCTAAAATTCAAGGACACCCTCTGCGACCCGGCAGGCAAAACAGCAAACTGGAAACCATCCAACTATGTATGTAAATTCAACGGCATCCGTTGCGACAAATATCCCAACGAAAAACAGAAGGCAGTCGCCGGACTTGACTTTAACGGCTACGCATTTTCCGCGGCGGACAAAAATAAACCGCTGGATCTTTTCGGAGTCCTGGCCCAGATCCCAGAGCTAGCATTCTTCCACGTCAACTCCAACAATTTCAGCGGCCAAGTCCCACCTCAAATAACCAGATTCCAATATTTCTACGAGCTCGACCTCAGCAACAACAAGATATGCGGTCAATTCCCAAATGAGGTCCTTCAATCAAAACAACTCTTGTTCCTAGATCTCAGGTTCAACCAACTTTACGGCTCAATTCCACCACAGCTTTTTAAGTTGCAGCTTGACGTCATCTTCATTAACAACAACAATCTCTCCGGAATCCTTCCGGATGAAGAATTCGGGTGCACGCCGGCAAGATATCTCACTTTCGCCAACAACAAGTTAACCGGCCCGATCCCCAAGAGTATCGGTAAAGCTACAAATATTACCGAAGTTCTGTTTTTGGGGAATCGGTTTTCAGGTTGTTTGCCTTATGAGATTGGGTTTTTGGTAAACGCCACGGTCTTTGATGTGAGCAAGAATTGGTTGACTGGTCCGATCCCACATTCGTTTGAGTGCTTAGATAAGATTCAGTTTTTGAATTTGGCCGATAATGAATTTTATGGGCCGGTTCCGGAGTCGGTTTGCCAGCTTCCGGAGCTCCAGAAGAATGGGAATCTGACGCTGTCGGGTAATTATTTTACCCAGGTGGGACCCGAATGTAGGAAACTGATTGACAGGAAAGTTCTGGATGTGCGGCGGAATTGTATTTTGGGACTTCAAGATCAGAGAACTCCGGCTGAGTGTAACAGGTTTTTCTCCAGAGTTAAGCCATGTCCGAACCCCGAGACTTTGAACATCGTACCTTGTAACAAGTACTACTATCAGAGCAACAAGGGGGTGGTGCCGCCGGGACCAGAAGCAGCAGCAGGAGGAGGTTCGCCACCGCCACCGACACCAGTGACCTACAAATCCCTCAAGCCACATCACTTGTGA 1467 0.4976 MGNISVCVLSLLMFASSFLTRSSYSHELTPSKREALEIIIGVTGNAPSSSPECGECESPPPPPPPSCEPPPPPPPCPPPPSPPPPPPPPPPPPPPPPPRPPQEGRRLKQAKNVLLKFKDTLCDPAGKTANWKPSNYVCKFNGIRCDKYPNEKQKAVAGLDFNGYAFSAADKNKPLDLFGVLAQIPELAFFHVNSNNFSGQVPPQITRFQYFYELDLSNNKICGQFPNEVLQSKQLLFLDLRFNQLYGSIPPQLFKLQLDVIFINNNNLSGILPDEEFGCTPARYLTFANNKLTGPIPKSIGKATNITEVLFLGNRFSGCLPYEIGFLVNATVFDVSKNWLTGPIPHSFECLDKIQFLNLADNEFYGPVPESVCQLPELQKNGNLTLSGNYFTQVGPECRKLIDRKVLDVRRNCILGLQDQRTPAECNRFFSRVKPCPNPETLNIVPCNKYYYQSNKGVVPPGPEAAAGGGSPPPPTPVTYKSLKPHHL 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00352 488 Pfam Leucine rich repeat N-terminal domain 108 146 IPR013210 -
Accr11g00352 488 Gene3D Ribonuclease Inhibitor 107 278 IPR032675 -
Accr11g00352 488 MobiDBLite consensus disorder prediction 43 105 - -
Accr11g00352 488 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 101 471 - -
Accr11g00352 488 MobiDBLite consensus disorder prediction 54 103 - -
Accr11g00352 488 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 179 272 - -
Accr11g00352 488 MobiDBLite consensus disorder prediction 462 488 - -
Accr11g00352 488 Gene3D Ribonuclease Inhibitor 279 448 IPR032675 -
Accr11g00352 488 MobiDBLite consensus disorder prediction 466 480 - -
Accr11g00352 488 SUPERFAMILY L domain-like 111 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00352 Accr-Chr11 4575530 4576996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00352 106 432 Leucine-rich Repeat extension Gene Families AT3G24480 41.945 6.27e-73 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00352 - - gmx:100795489 468.388