Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00344 ATGTTCTGCGAGTTCGTGTTCTATTTTGGATTGCTGGCGTTTCTGGGAATGCAGCTTCGTCTAACAATGGCAGATTGCCCTTTGGATTTTAGTGGATCAAACTTTACACTAGCATCCTCTATGTGCTCTAACCAGGTTGAAAGAGGGAAATGTTGCCGCTACATTAATGCCAACATTGCAGTTTCTGTTGCTCGTTTTGCAAATGTAACAAGAAGCCTTGGAGTCACCCCAAATGCTTCTGCCGTCTGTCTCCAGACCATATCTCAGAACTTGCAACATTATGGGGTTCCACGAAACGCGACAATTTTCTGTGGTTTTGGCACAAAAATCTCAGTAAATTATGAGTGCGAGGGCCGAACTACTGTCGTGCAAATGCTGCAGTCTCCCCGCTTTGGGCAGGTTGTGGAAAATTGTAAAGTGTCACTTGCCGAGGAAAGTAAATGCAAGAAATGCTTAAATGCTGGCATTAATTTCATACATCATCTGATAGGCAATGAAGATAACATAACACTGAGTACATGCCGTGATGCCACCTTTGCAGCATTGGCAAGCCAAGTTGATGAAATGTCTACCATTGATATTGCAAGCTGTTTCTTTGGGGTTCAAGGGCTTCTAAAACCTCATGCTTCAGAGCCATCCCCATCTTTGCCGACTCCAGAGGCTTTTCCTAGTCCACTGGTGGCAGATAGCCCAAGTCAGTCACTGTTAGGTGTACCTCTTAAGGGAAAGCACAGTTCATACCACTTGACAGTAATTCTTGCTATTGGTATTTCCGTCACTGTTGCTGCTGCTGTCATGCTCTTGGTCTTGATTGTTCTAATTCGTCGAAAAAGAAGAGAACAAGAGGAGCCTGATAATTTTAGTAAAACCCCTTCAAAAGCTACATCTTCTTGTGCAATGTGGAAATTTCAGGAAGGTCCATCATCTATGTTTCAAAAATTCAACTACAGGGAGATAAAGAAGGCAACGGGGGATTTCAGCACCATCATTGGGCAAGGGGGATTTGGAACAGTATATAAAGCTCATTTCAGTAATGATCTTGTGTTGGCAGTAAAGAGAATGAACAAAGTTTCAGAACAAGGGGAGGATGAATTTTGCAGAGAAATAGAGCTTCTTGCTCGGTTGCATCATCGGCATCTCGTTGCATTACGAGGTTTTTGTGTTAAAAATCAGGAGAGGTTTCTGATGTATGAGTACATGGAAAATGGAAGCTTGAAAGATCATCTTCATTCCCCTGGTAGAGCACCTCTAAGTTGGCGAACAAGAATCCAAATTGCCATTGATGTGGCTAATGCACTGGAGTATCTCCATTTCTATTGTGACCCTCCTCTATGGCACAGGGACATAAAATCTAGCAACATTTTACTGGATGAGAATTTTGTTGCAAAGTTAGCCGATTTCGGTCTTGCACTTGCTTCAAAAGATGGCTCCATATGCCTCGAAGCTGTAAACACCAACATCACAGGAACTCCAGGTTATATGGATCCTGAGTATGTGGTTACTCATGAGCTGACTGAGAAAAGTGATATATACAGTTATGGAGTATTACTACTAGAAATTGTGACAGGAAGACGAGCGATTCAAGATAATAAAAGTTTGGTAGAATGGGCACAGCCATATATGGGGCCAGATTCTGTAACGCGATCGATGGAGCTAGTGGATCCAAGTGTGAGGGAGTCTTTTGATTTGGATCAGCTCCAGACAGTAGTGTCCATAGTAGAATGGTGCACACAGAGAGAAGGCAGAACCAGGCCTTCAATAAAACAAGCCCTTAGGCTTCTGTATGAGACATCAGAACCTATGCACAGAGGGTTTCTTGAAGATGAAGAATGTGAAGGGAGTCAGCAGAGTGGCAGAAACAGCAGAGGTAAAATACAGGGAAATGAAGCTTTGTTTCAGAGTGGAGATGGAAGATATCTTGCTTCTTCTTCAAGTACATCGAGGTCCTATTGCAGCAGAAGCTTTCTACTTGAGACAAGTTTCCCACAGTCTCCTTTGAATATATCATCCGTGGAAGACAAATATCATTAG 2031 0.4279 MFCEFVFYFGLLAFLGMQLRLTMADCPLDFSGSNFTLASSMCSNQVERGKCCRYINANIAVSVARFANVTRSLGVTPNASAVCLQTISQNLQHYGVPRNATIFCGFGTKISVNYECEGRTTVVQMLQSPRFGQVVENCKVSLAEESKCKKCLNAGINFIHHLIGNEDNITLSTCRDATFAALASQVDEMSTIDIASCFFGVQGLLKPHASEPSPSLPTPEAFPSPLVADSPSQSLLGVPLKGKHSSYHLTVILAIGISVTVAAAVMLLVLIVLIRRKRREQEEPDNFSKTPSKATSSCAMWKFQEGPSSMFQKFNYREIKKATGDFSTIIGQGGFGTVYKAHFSNDLVLAVKRMNKVSEQGEDEFCREIELLARLHHRHLVALRGFCVKNQERFLMYEYMENGSLKDHLHSPGRAPLSWRTRIQIAIDVANALEYLHFYCDPPLWHRDIKSSNILLDENFVAKLADFGLALASKDGSICLEAVNTNITGTPGYMDPEYVVTHELTEKSDIYSYGVLLLEIVTGRRAIQDNKSLVEWAQPYMGPDSVTRSMELVDPSVRESFDLDQLQTVVSIVEWCTQREGRTRPSIKQALRLLYETSEPMHRGFLEDEECEGSQQSGRNSRGKIQGNEALFQSGDGRYLASSSSTSRSYCSRSFLLETSFPQSPLNISSVEDKYH 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00344 676 Gene3D Phosphorylase Kinase; domain 1 288 399 - -
Accr11g00344 676 Pfam Protein kinase domain 328 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00344 676 Pfam SPARK 24 168 IPR043891 -
Accr11g00344 676 PANTHER OS01G0750732 PROTEIN 167 618 - -
Accr11g00344 676 ProSiteProfiles Protein kinase domain profile. 324 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00344 676 CDD STKc_IRAK 330 594 - -
Accr11g00344 676 MobiDBLite consensus disorder prediction 606 626 - -
Accr11g00344 676 FunFam Putative receptor-like protein kinase 292 399 - -
Accr11g00344 676 SUPERFAMILY Protein kinase-like (PK-like) 308 597 IPR011009 -
Accr11g00344 676 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Accr11g00344 676 Gene3D Transferase(Phosphotransferase) domain 1 400 612 - -
Accr11g00344 676 FunFam Putative receptor-like protein kinase 400 602 - -
Accr11g00344 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Accr11g00344 676 SMART serkin_6 324 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00344 Accr-Chr11 4459837 4463635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00344 21 667 Receptor kinase-like Gene Family AT3G19300 60.703 0.0 742
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Accr11g00344 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00344 - - ahf:112715638 999.193