Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00340 ATGAGATCAAACATGAACTTCAAGGGCTACGAGGATGGTACTAACAATAATGGAAGCAACAAGCCACCACCTGCAAATCATCCCACACTCATGAGTCAATCTTCAATATACTCACTCACTTTTGAAGAGTTTCAGAGCACATTAGGTGGCCTTGGAAAGGACTTTGGTTCAATGAACATGGATGAACTCTTGAAGAACATATGGACAGCCGAAGAGACTCAGTCACTGGCCATGTCATCTTCAAATAATAATGGAGGCGAAGCCAGTAAGAACAACGCCACCATGATCAGCAACAACAACAGCAACGGCAATTATTATTACAGTAACCCGAATGGGAATTTGCAGAGACAAGGGTCACTTACTTTGCCCAGGACTCTTAGTCAAAAAACTGTTGATGAAGTTTGGAGGGACTTGATGAAAGAAAGTGGTGGTGGTGGTGGTGGGGCTAACACTAGTACGAAAGATATTAGTGGTGGGCCTGTTGCTTATGCTTCTGCTATGCCTCAGAGGCAACAAACTTTAGGTGAAATGACATTAGAGGAATTCCTGGTAAGAGCAGGGGTTGTGAGAGAGGACAGCAACAATAGTAATCATAATAATAACGATTCTAATGTGCCTCTACAAGTTGGAAGACCAACTCAATGGTTCAATAACGACGACGCTGGTTTAATGCTAGGGTTTCAGCAGCAACAGCCAAACATGAACTTGGGAAATACTAATTCCATGGTGAATAGTAACAATCCAGTTTCCAAACAACCTCCTACACTGTCATTACAGGTAAGTGCTACTACTAACCATACGCAGCAGCAGAACCACCAGCAGCCACCGCTTTTCCCCAAACCGGCGAATGTGGCTTTTACTGCAGCGGCGGCGGCGATGCATTTGATGAATACTTCTCATCAGCTTGACGGGAGGGGAGGAGGAGGGATGATTGGGGTTCAGGGAGGTGGGGGTTTGACGATGGCGGGGTCTCCGACGACTCAGATATCGCCGCCAGCGGAGGGTATGGCGAGGAGTAAGGGGGATGGGTCATTGCATTCGCCGGTGCCGTACGTGATTAACAGGCTGAGGAAGTGCAGTGCGATAGAGAAAGTGGTGGAGAGGAGACAGAGGAGGATGATTAAGAACAGAGAATCTGCTGCTAGGTCTCGGGCTCGCAAACAGGCCTATACTTTGGAACTGGAAGCTGAAGTCGAGAAACTCAAGATGTTGAACCGAGAACTGAAAAGAAAGCAGGCTAAATTTATGGAGAAGCAGAAGGATAACAGTGAGGCTCTGGTGACACTGAGCGGGGCATTGGGAGGCAAAAGACACTGCTTGAGAAGGACACTCACAGGACCATGGTAG 1347 0.4722 MRSNMNFKGYEDGTNNNGSNKPPPANHPTLMSQSSIYSLTFEEFQSTLGGLGKDFGSMNMDELLKNIWTAEETQSLAMSSSNNNGGEASKNNATMISNNNSNGNYYYSNPNGNLQRQGSLTLPRTLSQKTVDEVWRDLMKESGGGGGGANTSTKDISGGPVAYASAMPQRQQTLGEMTLEEFLVRAGVVREDSNNSNHNNNDSNVPLQVGRPTQWFNNDDAGLMLGFQQQQPNMNLGNTNSMVNSNNPVSKQPPTLSLQVSATTNHTQQQNHQQPPLFPKPANVAFTAAAAAMHLMNTSHQLDGRGGGGMIGVQGGGGLTMAGSPTTQISPPAEGMARSKGDGSLHSPVPYVINRLRKCSAIEKVVERRQRRMIKNRESAARSRARKQAYTLELEAEVEKLKMLNRELKRKQAKFMEKQKDNSEALVTLSGALGGKRHCLRRTLTGPW 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00340 448 MobiDBLite consensus disorder prediction 1 31 - -
Accr11g00340 448 MobiDBLite consensus disorder prediction 234 255 - -
Accr11g00340 448 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 31 448 IPR043452 GO:0003700|GO:0045893
Accr11g00340 448 MobiDBLite consensus disorder prediction 77 97 - -
Accr11g00340 448 SUPERFAMILY Leucine zipper domain 368 416 IPR046347 GO:0003700|GO:0006355
Accr11g00340 448 Pfam bZIP transcription factor 368 417 IPR004827 GO:0003700|GO:0006355
Accr11g00340 448 Coils Coil 387 421 - -
Accr11g00340 448 CDD bZIP_plant_BZIP46 368 421 - -
Accr11g00340 448 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 366 418 IPR004827 GO:0003700|GO:0006355
Accr11g00340 448 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 371 386 IPR004827 GO:0003700|GO:0006355
Accr11g00340 448 Gene3D - 366 421 - -
Accr11g00340 448 SMART brlzneu 364 429 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00340 Accr-Chr11 4431398 4434435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00340 30 448 bZIP Transcription Factor Family AT1G49720 47.222 5.02e-96 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr11g00340 bZIP_1 7.6e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00340 K14432 - jre:108988934 383.259