Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00310 ATGATGCATTCGAAGACCAGGATAATGTCTATATTGTTATGGAGTTATGTGAAGGAGGGGAGGGAGGAGCTTTTAGATAGGATATTATCAAGAGGAGGGAAATACTCAGAAGAAGATGCTAAGGCTGTCATGGTTCAGATACTAAACGTTGTTGCATTTTGTCATCTTCAGGGTGTGGTGCACCGAGATCTAAAGCCAGAGGTAGGGGTAGTCCTTTACTTTTGA 225 0.4222 MMHSKTRIMSILLWSYVKEGREELLDRILSRGGKYSEEDAKAVMVQILNVVAFCHLQGVVHRDLKPEVGVVLYF 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00310 74 Pfam Protein kinase domain 12 67 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00310 74 ProSiteProfiles Protein kinase domain profile. 1 74 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00310 74 Gene3D Transferase(Phosphotransferase) domain 1 21 67 - -
Accr11g00310 74 PANTHER SERINE/THREONINE-PROTEIN KINASE 22 67 - -
Accr11g00310 74 SUPERFAMILY Protein kinase-like (PK-like) 22 67 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00310 Accr-Chr11 4138226 4138825 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00310 23 67 EF-hand Containing Proteins AT3G50530 93.333 3.97e-25 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Accr11g00310 Pkinase 6.8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00310 K13412 - psom:113321259 92.4337