Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00309 ATGGGGCTTTGTACGTCCAAGCCGCAGAGGCCGAACCGATTTTCCGTTCAGGAACTAGAAGGCCACCATGGCTCCTGCGATCCTTCAAGCATCCCGAAAGGCTCTCCTACTCCGAAGAATGAGATCATTTCCGGGAAGCAGTCTCCGTTCTTTCCATTCTACAGCCCCAGCCCAGCCCGCTTCTTTAAGAAATCTCCGGCGCCGACGGGAGGACCCCAGAGTGCGAGTTCGACGCCGGGGAGAATTTTCCGGCGTCCCTTCCCTCCGCCGTCACCGGCGAAACACATAAAGGCTTTCCTAGCGAAGAGACAGGGAAAAAAGACTTCGACAGCGATACCGGAAGATGGAGAGGAGGTGGATTTGGACAAGAGGTTTGGGTTCTCGAAAGAGTTCACGAGTAGGCTTGAGGTTGGGGAAGAAGTGGGAAGAGGGCATTTTGGGTATACTTGTTCTGCTAGGTTTAAGAAAGGCGAGCATAAGGGCAAGCAAGTTGCGGTGAAGGTCATCCCTAAAGCTAAGATGACAACAGCAATTGCAATTGAAGATGTACGAAGGGAAGTTAAAATATTGCGAGCATTGACTGGACACAACAATCTGATACAATTCTATGATGCATTTGAAGACCAGGATAATGTCTATATTGTTATGGAGTTATGTGAAGGAGGGGAGCTTTTAGATAGGATATTATCAAGAGGAGGGAAATACTCAGAAGAAGATGCTAAGGCTGTCATGGTTCAGATACTAAACGTTGTTGCATTTTGTCATCTTCAGGGTGTGGTGCATCGAGATCTAAAGCCAGAGAATTTCTTGTATGCTTCAAAGGATGAGAACTCTGAGTTAAAGGCAATAGACTTCGGATTATCAGACTTTGTCAAACCAGATGAAAGGCTCAATGACATTGTTGGAAGTGCATACTATGTGGCACCTGAAGTTCTACATAGATCTTATAGTATAGAAGCTGATATATGGAGCATAGGTGTAATAGCATATATTCTTTTATGTGGTAGTCGCCCCTTTTGGGCTCGAACAGAGTCTGGTATTTTTCGGGCAGTTTTGAAAGCAGATCCAAGCTTTGATGAAGCTCCCTGGCCCTCTTTATCTTTGGAAGCAAAAGATTTTGTCAAGCGTCTATTAAATAAGGACCCACGGAAGCGACTTTCAGCTGCTCAGGCCTTAAGTCACCCTTGGATACGAAATTACAATAACGTAAAAGTTCCTCTTGATATTCTAATATTCAGGCTCATGAAGGCTTATATGCGATCATCATCCTTGCGGAAGGCTGCTTTAAGGGCCTTATCCAAGACATTGACTGCAGATGAACTTTATTATCTGAGGGAGCAGTTTACTTTGTTAGGGCCAAGCAAAAATGGCAGTTTAACCTTGGATAACATTAGGACGGCCCTGATGAAAGATGCCACAGATGCCATGAAGGAGTCTCGGATCCCTGATCTTCTTGCCTCGCTAAATGCATTACAATATAGAAGAATGGATTTTGAAGAATTTTGTGCCGCTGCGTTAAGTGTGCATCAGCTTGAAGCTCTAGATCGATGGGAACAACATTCACGCTGTGCTTATGAACTTTTTGAGAAAGACGGAAACAGGGCTATAATCATTGAAGAACTTGCCTCAGAACTAGGACTGGGTCCTTCTATTCCAGTTCATGTCGTACTACAAGACTGGATAAGGCACACTGATGGGAAGCTAAGCTTTCTCGGGTTCGTCAAATTGTTACACGGTGTATCGAGCCGAAGTCTTGCAAAAGTTCAATAA 1770 0.4486 MGLCTSKPQRPNRFSVQELEGHHGSCDPSSIPKGSPTPKNEIISGKQSPFFPFYSPSPARFFKKSPAPTGGPQSASSTPGRIFRRPFPPPSPAKHIKAFLAKRQGKKTSTAIPEDGEEVDLDKRFGFSKEFTSRLEVGEEVGRGHFGYTCSARFKKGEHKGKQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHNNLIQFYDAFEDQDNVYIVMELCEGGELLDRILSRGGKYSEEDAKAVMVQILNVVAFCHLQGVVHRDLKPENFLYASKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYSIEADIWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSLEAKDFVKRLLNKDPRKRLSAAQALSHPWIRNYNNVKVPLDILIFRLMKAYMRSSSLRKAALRALSKTLTADELYYLREQFTLLGPSKNGSLTLDNIRTALMKDATDAMKESRIPDLLASLNALQYRRMDFEEFCAAALSVHQLEALDRWEQHSRCAYELFEKDGNRAIIIEELASELGLGPSIPVHVVLQDWIRHTDGKLSFLGFVKLLHGVSSRSLAKVQ 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00309 589 MobiDBLite consensus disorder prediction 18 94 - -
Accr11g00309 589 SUPERFAMILY EF-hand 425 579 IPR011992 -
Accr11g00309 589 Gene3D - 437 506 - -
Accr11g00309 589 CDD STKc_CAMK 136 396 - -
Accr11g00309 589 MobiDBLite consensus disorder prediction 30 44 - -
Accr11g00309 589 SMART serkin_6 135 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00309 589 FunFam CDPK-related kinase 1 128 223 - -
Accr11g00309 589 SUPERFAMILY Protein kinase-like (PK-like) 131 441 IPR011009 -
Accr11g00309 589 FunFam CDPK-related kinase 3 127 299 - -
Accr11g00309 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Accr11g00309 589 Gene3D - 417 576 - -
Accr11g00309 589 Gene3D Phosphorylase Kinase; domain 1 137 224 - -
Accr11g00309 589 Gene3D Transferase(Phosphotransferase) domain 1 225 416 - -
Accr11g00309 589 Pfam Protein kinase domain 136 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00309 589 ProSiteProfiles Protein kinase domain profile. 135 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00309 589 ProSitePatterns Protein kinases ATP-binding region signature. 141 167 IPR017441 GO:0005524
Accr11g00309 589 PANTHER SERINE/THREONINE-PROTEIN KINASE 122 564 - -
Accr11g00309 589 FunFam Calcium-dependent protein kinase SK5 307 402 - -
Accr11g00309 589 FunFam CDPK-related kinase 1 433 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00309 Accr-Chr11 4120613 4127042 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00309 1 585 EF-hand Containing Proteins AT3G50530 72.397 0.0 915
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Accr11g00309 Pkinase 2.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00309 K13412 - gmx:100798913 1013.06