Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00300 ATGGATCGGTCGGCGATCACAGTTGGGCCGGGGATGGATTTGCCGATTATGCACGACAGTGACCGGTATGAGCTCGTGCGTGATATTGGGTCTGGAAATTTTGGAGTCGCGAGGCTTATGAGGGACAAGCAAACAGACGAGCTCGTTGCTGTGAAGTACATAGAGAGGGGTGATAAGATCGATGAAAATGTGCAAAGGGAAATTATAAATCACAGATCACTTAGGCACCCCAATATTGTCAGGTTCAAGGAGGTCATATTGACACCAACACATCTGGCTATTGTAATGGAATATGCTTCTGGAGGAGAGCTATTTGAACGAATATGCAATGCTGGGCGGTTCAGTGAGGATGAGGCTCGTTTCTTTTTCCAACAACTTATATCAGGGGTTAGCTACTGTCATGCAATGCAAGTATGCCACCGAGACTTGAAGTTGGAGAACACTCTATTGGATGGGAGCCCAGCTCCTCGTTTGAAAATATGTGATTTTGGGTACTCCAAGTCCTCTGTGCTACATTCACAACCAAAATCTACAGTTGGTACTCCAGCTTATATTGCTCCAGAGGTTTTGCTTAAGAAGGAGTATGATGGCAAGATTGCGGATGTATGGTCTTGTGGGGTGACTTTATATGTCATGTTAGTGGGTGCATATCCTTTTGAGGACCCAGAGGAACCAAAAAATTTCCGCAAGACAATACATAGGATTTTGAACGTTCAATACTCAATTCCTGACTATGTTCATATATCTCCTGAATGCCAACATCTCATCTCGAGGATCTTTGTTGCTGACCCGGCAAAGAGGATAAGCATCCCTGAGATCAGAAACCATGAATGGTTTCTAAAGAACCTTCCAGGTGATCTTATGGATGATCATAGTACAACCAACAATCAGTTTGAGGAGCCTGATCAACCAATGCAGAGCATAGAGGAAATCATGCAAATAATTGCTGAAGCTACGATTCCTGCAGCCGGGACTCAGTCTCTCAACAACTATCTTAACGGAAGCTTAGATATTGATGATGACATGGAGGAGGACCTCGAGTCCGACCCTGATCTCGACATCGATAGCAGCGGAGAAATAGTCTATGCAATGTAA 1095 0.4438 MDRSAITVGPGMDLPIMHDSDRYELVRDIGSGNFGVARLMRDKQTDELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYSIPDYVHISPECQHLISRIFVADPAKRISIPEIRNHEWFLKNLPGDLMDDHSTTNNQFEEPDQPMQSIEEIMQIIAEATIPAAGTQSLNNYLNGSLDIDDDMEEDLESDPDLDIDSSGEIVYAM 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00300 364 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Accr11g00300 364 SUPERFAMILY Protein kinase-like (PK-like) 16 313 IPR011009 -
Accr11g00300 364 FunFam Serine/threonine-protein kinase SRK2E 14 98 - -
Accr11g00300 364 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00300 364 CDD STKc_SnRK2-3 22 278 - -
Accr11g00300 364 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00300 364 FunFam Serine/threonine-protein kinase SRK2E 99 287 - -
Accr11g00300 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Accr11g00300 364 PANTHER SERINE/THREONINE KINASE 22 310 - -
Accr11g00300 364 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Accr11g00300 364 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00300 364 Gene3D Transferase(Phosphotransferase) domain 1 99 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00300 Accr-Chr11 4016911 4020656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00300 16 304 CBL-interacting serine-threonine protein kinases AT4G24400 42.140 8.85e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Accr11g00300 Pkinase 4.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00300 K14498 - qsu:112032862 686.411