Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00245 ATGACGGAAAGTCAGTCATCTTCTTCTTCGAGTAAACGGGGGACATTGGTAGCAGATCTCGATTTTCAATTGAAGAGGGTGTCGGTGCAACTTTGGATTCTTGGAGGTCAAAAAGAGCCACACTTGGTCAAACAGCATGGGTCTCTTGCTGACTTCAATCAGGAGTTCGATCGTGTCACTGATAATCTTAAATTCACTGAAGATGAATTGGTTCGTGTGTATATTGCTGGCCTTAAGGACGAAATTGCGGCATCATTATGTCTCTCTAGGCCGCCGACTACTCTGTTGGAAGCAAGAAGTCGTGCCCGCGATCAAGAAATTGTCAGTCAAATGGAATCGCCGAAAGAGTCTACAAATGATGGGTCATCTTTGCCGTGGACTCAAGAAGTTCAAGAAAAAGCTTTGGAAGATCAAGAAGCTTGTGGGTCTTCCCAAGAAGAGTCCTTCGACCAGCAAGAGACTCTTACAGATGGCCCCAACGAGACTGTGCGAACTAGTGGTGAGGATGATTCCGGAAAGACCCAAGATTCTCGTGCAGCTGTCTCACCCCAGTTGCCACCATCTGCACGGCCGATTGTTCTTGCGTTGCCGGCGTTTGTGCCTCTGGAAGAAGATCAAATAAGAAGAGAAAGAAAAAGTCAGTTAAACAGGGAATCGGCTGGAAGATCGGGGATACGCAAGCAGCAAGAACATGAAGAACTACAAAATATGAGGGACAGACTACAAAATATGAGGGACAATCTTATCCGTGAAATTTCCACTATGAAGAAAAGTCTACTGAATCTTTCTGAGGATTGCATGGAGCTGTCTTGTTCAAATGACGCTATTGAGAAAGAGATCGTCGAGAAGTATGGACCAGACGCCATTGCCGATCTTTTGCCCTTCAAGCCAGCTAGAATGTCTTCTGATGAAAGCCCCAGTCAGGGAAGCGACCGATCACAATGA 945 0.4603 MTESQSSSSSSKRGTLVADLDFQLKRVSVQLWILGGQKEPHLVKQHGSLADFNQEFDRVTDNLKFTEDELVRVYIAGLKDEIAASLCLSRPPTTLLEARSRARDQEIVSQMESPKESTNDGSSLPWTQEVQEKALEDQEACGSSQEESFDQQETLTDGPNETVRTSGEDDSGKTQDSRAAVSPQLPPSARPIVLALPAFVPLEEDQIRRERKSQLNRESAGRSGIRKQQEHEELQNMRDRLQNMRDNLIREISTMKKSLLNLSEDCMELSCSNDAIEKEIVEKYGPDAIADLLPFKPARMSSDESPSQGSDRSQ 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00245 314 Coils Coil 227 265 - -
Accr11g00245 314 Coils Coil 49 69 - -
Accr11g00245 314 MobiDBLite consensus disorder prediction 105 188 - -
Accr11g00245 314 Pfam bZIP transcription factor 204 262 IPR004827 GO:0003700|GO:0006355
Accr11g00245 314 CDD bZIP_plant_GBF1 209 257 IPR045314 GO:0003700|GO:0006355
Accr11g00245 314 SUPERFAMILY Leucine zipper domain 207 262 IPR046347 GO:0003700|GO:0006355
Accr11g00245 314 SMART brlzneu 204 268 IPR004827 GO:0003700|GO:0006355
Accr11g00245 314 MobiDBLite consensus disorder prediction 141 162 - -
Accr11g00245 314 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 206 269 IPR004827 GO:0003700|GO:0006355
Accr11g00245 314 MobiDBLite consensus disorder prediction 210 233 - -
Accr11g00245 314 MobiDBLite consensus disorder prediction 111 129 - -
Accr11g00245 314 PANTHER G-BOX-BINDING FACTOR 3-RELATED 109 297 IPR044827 GO:0003700|GO:0006355|GO:0043565
Accr11g00245 314 MobiDBLite consensus disorder prediction 295 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00245 Accr-Chr11 3484717 3487510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00245 198 292 bZIP Transcription Factor Family AT4G36730 36.458 1.09e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr11g00245 bZIP_1 1.7e-06 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00245 - K09060 gmx:102665715 94.3597