Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00225 ATGGCTTCGAATTCCGATTCCTCTCCTTCGCCTGAGTCATCTCCGTCGGATTCTCCTCCACCACCGCCACCGGATTCAAGTTCATCTGGCGATTCCTCTTCCCCTCCCCCACCACAATCCCCTCCGCCACCGTCACAGTCTCCTCCATCGCCGCCGCCACCACCATCTAACAGCCAATCTCCCCCACCGCCATCCGACCAAGACAATGGTGGAGACAACAGTAACTCGTCCCCTCCGCCTCCTCCACCTCCTAATAGCAACAATGGTGGAAATAATAATAAAGGGAGCCCTCCGCCACCACCACCGCAGTCAAATTCCAAAGGAGATTTTTCACCTCCACCGCCAGTGCACCGGTTGTCTCCACCAGAAAAAAGTTTACATGGATCATCGAATAGTACATCACCGCCATCAGGTAGCAATGACGATGGATCTGAATTGAGCGTACCGGCTATTATTGGTTTGGCTGCAGGAGCTGGCTTGTTGCTTCTTGTGTTCATCTGCATCTTCGTTGTATGCAGCAGAAGGAGGAAGAGATCTGAAGGTCCCGTTATTTACTACACCAACAAAAAATTTGATAATGATGACTATTACACGCACTCAAAGAAGGGAAACAATTGGAACAATGGTGATCAACATGTCATGAATATTCCAGCACCACCAGGAGCTTGGGGCGCACCGCCAGCTCCATTCTCTGGAAACATGAACAGCAGTGAGATGAGCAGTGCAAGCTATTCAGGACCGGTGGGTGTGCCTCTGCCTCCGCCACACCCTTTGGTGGCGATAGGGTTCAACAAGAGCACTTTCACGTTGGAAGAGCTAACAGCTGCAACAAATGGTTTCGCCGAAGCAAACCTACTGGGACAAGGTGGGTTTGGGTATGTGCATAAAGGGGTGCTACCCAATGGTAAGGAAATAGCCGTGAAGAGTCTAAAGTCCACCAGCGGCCAAGGTGACAAAGAGTTTCAAGCGGAGGTCGATATCATTAGCCGAGTTCATCATCGCCATCTTGTTTCTCTGGTTGGCTACTGTATTCAAGATGGTCGTAGTCTTTTGGTCTATGAGTTTGTACCCAACAAAACTATGGAATACCATCTTCACGGAAAGGACCGACCTGTTATGGATTGGCCTACTAGACTCAAAATTGCAATTGGATCGGCCAAGGGACTTGCTTACTTGCACGAGGATTGCCACCCTCGAATCATCCACCGTGACATAAAGGGCGCAAACATTCTAATCGAAAACAACTTTGAAGCTAAGGTGGCAGATTTTGGATTGGCAAAGCTTACACAAGACAACAACACCCATGTTTCCACCCGTGTAATGGGAACATTTGGGTATTTGGCTCCTGAGTATGCATCTAGTGGGAAATTGACTGAGAAGTCTGATGTGTTCTCATTCGGCATTATGCTTCTGGAGCTCATAACAGGACGACGTCCCGTTGACTCCACTGGAGATTATGAAGAGGACAGTTTAGTTGACTGGGCGAGAAGTCTTTGCATGAAGGCGATGGAAAGTGGAAACTTTGAAGGTCTGGCTGATCCACGACTAGGCAATGATTATGATATGCAGGAGATGGCCCGTATGGTGGCTTGTGCTGCTGCCAGCGTCAGGCACTCTGCAAGAAGGCGACCAAAAATGAGTCAAATAGTAAGGGCACTGGAGGGAGACGTGTCACTGGATGATCTGAGCGAGGGGGTGAAGCCAGGGCAGAGTTCAATGTTCACAAGCAACAGTATGGAGTATGACGCAAGCAGTTACAGTGCAGACATGAAGAAGTTCAGGAAGCTTGCATTAGACAGCAGTTATGCCAGCAGTGAGTTTGGCCAAACCAGTGAGTATGGTCTCAACCCTTCCTCTTCAAGCAGCGACACTCACTCTTCTGAATACAACAAAACCAACCATCATCTGCATGCCACCACCCCCTAA 1926 0.4922 MASNSDSSPSPESSPSDSPPPPPPDSSSSGDSSSPPPPQSPPPPSQSPPSPPPPPSNSQSPPPPSDQDNGGDNSNSSPPPPPPPNSNNGGNNNKGSPPPPPPQSNSKGDFSPPPPVHRLSPPEKSLHGSSNSTSPPSGSNDDGSELSVPAIIGLAAGAGLLLLVFICIFVVCSRRRKRSEGPVIYYTNKKFDNDDYYTHSKKGNNWNNGDQHVMNIPAPPGAWGAPPAPFSGNMNSSEMSSASYSGPVGVPLPPPHPLVAIGFNKSTFTLEELTAATNGFAEANLLGQGGFGYVHKGVLPNGKEIAVKSLKSTSGQGDKEFQAEVDIISRVHHRHLVSLVGYCIQDGRSLLVYEFVPNKTMEYHLHGKDRPVMDWPTRLKIAIGSAKGLAYLHEDCHPRIIHRDIKGANILIENNFEAKVADFGLAKLTQDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGIMLLELITGRRPVDSTGDYEEDSLVDWARSLCMKAMESGNFEGLADPRLGNDYDMQEMARMVACAAASVRHSARRRPKMSQIVRALEGDVSLDDLSEGVKPGQSSMFTSNSMEYDASSYSADMKKFRKLALDSSYASSEFGQTSEYGLNPSSSSSDTHSSEYNKTNHHLHATTP 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00225 641 MobiDBLite consensus disorder prediction 1 143 - -
Accr11g00225 641 SUPERFAMILY Protein kinase-like (PK-like) 258 553 IPR011009 -
Accr11g00225 641 FunFam proline-rich receptor-like protein kinase PERK1 258 355 - -
Accr11g00225 641 Gene3D Phosphorylase Kinase; domain 1 257 355 - -
Accr11g00225 641 MobiDBLite consensus disorder prediction 606 641 - -
Accr11g00225 641 FunFam Proline-rich receptor-like protein kinase PERK1 356 564 - -
Accr11g00225 641 MobiDBLite consensus disorder prediction 124 143 - -
Accr11g00225 641 MobiDBLite consensus disorder prediction 13 62 - -
Accr11g00225 641 ProSiteProfiles Protein kinase domain profile. 280 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00225 641 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 157 605 IPR047117 -
Accr11g00225 641 ProSitePatterns Protein kinases ATP-binding region signature. 286 308 IPR017441 GO:0005524
Accr11g00225 641 MobiDBLite consensus disorder prediction 94 120 - -
Accr11g00225 641 Gene3D Transferase(Phosphotransferase) domain 1 356 564 - -
Accr11g00225 641 SMART serkin_6 280 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00225 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 400 412 IPR008271 GO:0004672|GO:0006468
Accr11g00225 641 Pfam Protein tyrosine and serine/threonine kinase 284 505 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00225 Accr-Chr11 3122449 3126904 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00225 119 631 Trihelix Transcription Factor Family AT1G70460 47.961 4.22e-156 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Accr11g00225 PK_Tyr_Ser-Thr 7.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00225 - - gmx:100806299 699.123