Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00220 ATGGCCTCCGACGACTCTCCCGGTCACGGTCTTTCGCAGCTCTCTAACAAAACTCCATTTCTCGGCTTGAAGCTCTACTTTGTGATCGGCATATTACTTCTAATCGTACTGGCATTTTTGCTTCTGATCTTTCTCTGCGTACGCCGGAGTCGAATCTCGACGAAGCGTAAATTGCGGGTGAAGCATAGTTCCGGGACGATTCCCTTGGTCTCCAAGGAGATCGTGGAAGTCAAAGCCCTGGATCTCGAGCAGAATTATGAGCTAGCAGAGGTTAAAGTTGGGGACGAGGATCCGAAGAAGGAGAAGGTTGAGAGAAGAGGGAAGAAGACGAGCGACGAGAGTGATGTTTCCAGTGGTAGCCGCAGTGACGTGTCGGTGGACGCACTGAACATAGGGTGGGGACGATGGTATAGCCTGAGGGAGCTGGAGGATGCGACGCGTGGGTTTGCGGAAGAAAGTGTGATCGGTGAAGGAGGGTATGGTATTGTGTACAGAGGAGTTCTTGAAGATGGGTCGGTGGTGGCTGTGAAGAATCTTCTGAACAACAAGGGTCAAGCAGAGAAGGAGTTTAAGGTGGAAGTTGAAGCCATTGGAAAAGTAAGGCATAAGAATTTGGTGGGTTTAGTTGGATATTGCGCAGAAGGTCCTCAAAGGATGCTTGTTTATGAGTATGTTGATAATGGAAATTTGGAGCAGTGGTTGCATGGTGATGTTGGGCCTGTTAGTCCCTTGACATGGGATATACGAATGAAAATTGCCATTGGGACAGCAAAAGGGCTGGCCTATCTGCATGAAGGATTAGAACCCAAAGTGGTGCACCGAGATATAAAATCGAGTAACATTCTTTTGGACAGAAAGTGGAATGCTAAAGTATCAGACTTTGGACTAGCCAAGCTATTGGGCTCAGAGAAGACCTATGTCACCACACGTGTAATGGGGACATTTGGATACGTTTCACCTGAGTATGCAAGCACAGGAATGCTTAATGAGGGAAGTGATGTGTATAGCTTTGGAGTTCTGTTCATGGAGATAATTACAGGAAGAAGTCCTATTGATTATTCTAGACCACCTGCAGAGATGAATTTGACTGATTGGTTCAAGGGAATGGTAGCAAGTCGTCGTGGTGAAGAGCTGGTAGATCCTTTGATTGAGGTCCAGCCCTCTCCAAGATCTTTGAAACGAGCTTTGCTGGTTTGCCTGCGCTGTATAGATTTGGATATTAGTAAACGACCGAAGATGGGTCAAATCGTTCATATGCTTGAGGCAGATGATTTCCCCTTTCGTTCTGAACTTCGTACAATAAGAGAGAAAGAGCCCGTTCTTCCTTCGCATTCCCCAATTCCTCGGAAAGTTCAATATCCCCCCAAGGATGTGGACTCTATAGAACAGTCAAGAAGGAGATGA 1404 0.4672 MASDDSPGHGLSQLSNKTPFLGLKLYFVIGILLLIVLAFLLLIFLCVRRSRISTKRKLRVKHSSGTIPLVSKEIVEVKALDLEQNYELAEVKVGDEDPKKEKVERRGKKTSDESDVSSGSRSDVSVDALNIGWGRWYSLRELEDATRGFAEESVIGEGGYGIVYRGVLEDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGPQRMLVYEYVDNGNLEQWLHGDVGPVSPLTWDIRMKIAIGTAKGLAYLHEGLEPKVVHRDIKSSNILLDRKWNAKVSDFGLAKLLGSEKTYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLFMEIITGRSPIDYSRPPAEMNLTDWFKGMVASRRGEELVDPLIEVQPSPRSLKRALLVCLRCIDLDISKRPKMGQIVHMLEADDFPFRSELRTIREKEPVLPSHSPIPRKVQYPPKDVDSIEQSRRR 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00220 467 MobiDBLite consensus disorder prediction 97 116 - -
Accr11g00220 467 PANTHER OS01G0323000 PROTEIN 12 436 - -
Accr11g00220 467 ProSitePatterns Protein kinases ATP-binding region signature. 155 177 IPR017441 GO:0005524
Accr11g00220 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Accr11g00220 467 Gene3D Transferase(Phosphotransferase) domain 1 225 431 - -
Accr11g00220 467 CDD STKc_IRAK 155 421 - -
Accr11g00220 467 MobiDBLite consensus disorder prediction 97 122 - -
Accr11g00220 467 ProSiteProfiles Protein kinase domain profile. 149 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00220 467 MobiDBLite consensus disorder prediction 437 467 - -
Accr11g00220 467 Gene3D Phosphorylase Kinase; domain 1 116 224 - -
Accr11g00220 467 SMART serkin_6 149 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00220 467 SUPERFAMILY Protein kinase-like (PK-like) 123 421 IPR011009 -
Accr11g00220 467 FunFam Putative receptor-like serine/threonine-protein kinase 225 435 - -
Accr11g00220 467 FunFam Probable serine/threonine-protein kinase At1g01540 129 224 - -
Accr11g00220 467 Pfam Protein kinase domain 150 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00220 Accr-Chr11 3082894 3086067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00220 29 423 Trihelix Transcription Factor Family AT1G70460 41.500 2.78e-91 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Accr11g00220 Pkinase 6.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00220 - - jre:109011190 690.263