Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00215 ATGCTTTCATGTCAAAAATACCAGTTTCACTCTCCATCCTCTTTTATTCTCCAATCCCTCTCCACCCCAACTTCCACCATTGTCAACTGCCAAAATCCACATGGCCCAGATACCCCCAACCTCATCCTCCGCAAGCAGAACTCCAAATCCACCTCCTTTCTCCTTCACCAACTATCTCTCGACCAAGAAAACCATCGTTCCCAGCAATTCAATCTCAAATCCAGTGACCTTCAACACGACATGCCCGATGAAGAGAAGATTAGGCTTCTAGAGCTTTCCCTTGTAAGGAAAAGAACCCCTCAGTTTCCTGGGTCCATCTATGTTCAATCTCCTAGTGATACCGATGTGGGTTCTTCTTTGCCGCCTCTGCGAACTCTGTTTGGAGAAAAAATTGAAGACGATGGAGCGGACCAGGAGGAGATAATAATGCGCGCGATTGAGATTCGAAGGAAGGTGACGCGAGAGATTTTGTTGGAAGCCATGAGGAAGGGCAAGTTTGGAATCACGTACACTACCAATTTGGTCAATCGATTGACTGGTTTTATCGATTATGTCATGATTGAAGCTGCTTCGATGAAAAGAATACCTCAGTATTCGCATTCTACGTTCAATTTACGCGCCAAAACTGTCATAGACGACTTACAAGTTGTGCCTCTTATCAGATGGTTGAAACATAATGCACTGTCATATCATCGGATATCAAAGCTCATTTTGATGTCAAGAGGAAACCTCGAGTCTATAAGACGTCTAGCTGAGTGGTTGAGATCAGTACACGTGAAGGGAGAATATCTTGGGGTTACACTTGTGAATGCTGGAGATAATATTCTGGAACGCAGCAATGAGGAACTGGATGGGATCATTGAGTATTTAGAGAGCAAGGGAGTCAGGAGGGATTGGATGGGTTATGTCATAAGCCGATGCCCTCAATTGTTATCTTACAGCTTGGAAGAAGTGAAGACTCGCGTGAAATTCTACCTAGATATGGGTTTAAATGATCATGATTTTGGCACAATGGTTTTTGATTATCCTAAAGCTCTTGGTTACCTTACTCTAGAAGAAATGAATCAAAAGGTTAATTACTTAAAGGAGTTTGGGCTCAAAACTGAGGATGTGGGCAGATTGCTAGCATTTAAGCCACATTTGATGGGATGTAGCATTGAAGAAGGATGGAAGCCTCTTGCTAAGTATTTGTACTATTATGGGGTTACCCAAGATGGTATGAGGAGAATGCTTATGATCAAACCAATGGTCTTTTGTATTGATTTGCAGACAACTATTGTGCCTAAGGTAAAGTTTTTTCAGGATCTAGGGATTCGAGATGATGCAATTGGAAACATGCTTGTAAAGTTTCCTACTCTGCTCACATACAGCCTATACAAGAAGATTAGGCCAGTGGTCATATTCTTGTTGACAAAAGCTGGCGTCAGCGATGAAGATATTGCAAAGACTATTGCTTTGGGACCAGAGCTCTTGGGATGCAGCATAACACATAAGCTTGAAGTGAATGTAAAATATTATCTGTCACTCGGCATCCGTCTTACGCAATTGGGTGAGATGATTGCGGATTTCCCAATGCTGCTCAGATACAACATAGACATTCTTCGTCCCAAGTATAGTTATTTGCGGCGAACCATGGTCCGGCCTTTGAATGATCTCATTGAGTTTCCAAGGTTTTTCAGTTATTCTCTCAACAGTCGAATCATTCCAAGGCACAGGGTTCTGGTGGAAAATCGGATTAATTTGAAGCTGCGATACATGTTAGCTTGTTCTGATGAAGAGTTCAGGAAATTGGTTGACTCTCAAATTAGAAAGCGACAAACACTGCTATCTACAGGCATGAGTGCTGATGTTACAGACCCCCACACATGA 1869 0.4248 MLSCQKYQFHSPSSFILQSLSTPTSTIVNCQNPHGPDTPNLILRKQNSKSTSFLLHQLSLDQENHRSQQFNLKSSDLQHDMPDEEKIRLLELSLVRKRTPQFPGSIYVQSPSDTDVGSSLPPLRTLFGEKIEDDGADQEEIIMRAIEIRRKVTREILLEAMRKGKFGITYTTNLVNRLTGFIDYVMIEAASMKRIPQYSHSTFNLRAKTVIDDLQVVPLIRWLKHNALSYHRISKLILMSRGNLESIRRLAEWLRSVHVKGEYLGVTLVNAGDNILERSNEELDGIIEYLESKGVRRDWMGYVISRCPQLLSYSLEEVKTRVKFYLDMGLNDHDFGTMVFDYPKALGYLTLEEMNQKVNYLKEFGLKTEDVGRLLAFKPHLMGCSIEEGWKPLAKYLYYYGVTQDGMRRMLMIKPMVFCIDLQTTIVPKVKFFQDLGIRDDAIGNMLVKFPTLLTYSLYKKIRPVVIFLLTKAGVSDEDIAKTIALGPELLGCSITHKLEVNVKYYLSLGIRLTQLGEMIADFPMLLRYNIDILRPKYSYLRRTMVRPLNDLIEFPRFFSYSLNSRIIPRHRVLVENRINLKLRYMLACSDEEFRKLVDSQIRKRQTLLSTGMSADVTDPHT 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00215 622 Gene3D Transcription termination factor 3, mitochondrial 376 601 IPR038538 -
Accr11g00215 622 Pfam mTERF 246 326 IPR003690 GO:0003690|GO:0006355
Accr11g00215 622 Pfam mTERF 287 594 IPR003690 GO:0003690|GO:0006355
Accr11g00215 622 SMART mt_12 336 367 IPR003690 GO:0003690|GO:0006355
Accr11g00215 622 SMART mt_12 301 331 IPR003690 GO:0003690|GO:0006355
Accr11g00215 622 SMART mt_12 517 547 IPR003690 GO:0003690|GO:0006355
Accr11g00215 622 SMART mt_12 372 403 IPR003690 GO:0003690|GO:0006355
Accr11g00215 622 SMART mt_12 444 476 IPR003690 GO:0003690|GO:0006355
Accr11g00215 622 SMART mt_12 408 439 IPR003690 GO:0003690|GO:0006355
Accr11g00215 622 SMART mt_12 549 580 IPR003690 GO:0003690|GO:0006355
Accr11g00215 622 SMART mt_12 481 512 IPR003690 GO:0003690|GO:0006355
Accr11g00215 622 FunFam BnaA09g42960D protein 374 605 - -
Accr11g00215 622 PANTHER CGI-12 PROTEIN-RELATED 276 374 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00215 Accr-Chr11 3033650 3036957 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr11g00215 mTERF 2.6e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00215 K15031 - qsa:O6P43_001902 890.567