Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00208 ATGGCATCATCATCATCATCAAGTTGTGTAAGGAGAGAGGAGAATGATACAGAGAGGTGTTTTTGGACAGAGAAACAGAACAAGGTGTTTGAGAAGGCACTGGCAAAGTACGAGGAAGATACACCAGAAAGGTGGGAGGAAGTGGCAAGAGAAGTTGGAGGAGGCAAATCTGCACAAGAAGTTCAAAGACATTATCAGATTCTGTTGCATGATCTCTCAAACATTGAATCTGGACTTGTTCCTATTCCTAATTATAAATCTTCATCACCCTCCTCCGTGCTTGATCACCAGGACGGGCTTTTGAAGCATCCGATCCTGAATTAA 324 0.429 MASSSSSSCVRREENDTERCFWTEKQNKVFEKALAKYEEDTPERWEEVAREVGGGKSAQEVQRHYQILLHDLSNIESGLVPIPNYKSSSPSSVLDHQDGLLKHPILN 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00208 107 Gene3D - 14 82 - -
Accr11g00208 107 SMART sant 18 71 IPR001005 -
Accr11g00208 107 Pfam Myb-like DNA-binding domain 22 66 IPR001005 -
Accr11g00208 107 FunFam Transcription factor SRM1 14 82 - -
Accr11g00208 107 MobiDBLite consensus disorder prediction 86 107 - -
Accr11g00208 107 SUPERFAMILY Homeodomain-like 21 77 IPR009057 -
Accr11g00208 107 ProSiteProfiles Myb-like domain profile. 14 69 IPR001005 -
Accr11g00208 107 CDD SANT 22 69 IPR001005 -
Accr11g00208 107 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 92 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00208 Accr-Chr11 2979190 2980316 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr11g00208 Myb_DNA-binding 5.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00208 - - gmx:100798314 116.701