Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00207 ATGTTGCGCTGTCTCAACACCTCCGGCAACTTCACCGGAAACTGCTCCGATATGATGGTGTTGGAAAGGCAAAGTATGAGGATGAAATGGCAACAAGAACAACAATATCACCAAAACCAGAACTTTTATGGTGATTCTGCGCTCGGTGAGGTCGTCGCTAAGTCGATCAAGCCCGAAATGGGTCAACCCACGTTTCCCAGTTTCGGGTTCGGGTCTCCTGGGTTTGAATCAAGTTCTGCAATTTCAACGACTTCCATGGCAGCCGCTGAAGAAACCAGAAACGGAGATTCTGTTTCAGAAAAGGAAAAAATGAGCTCCGCAAGTGGGAAACAGAGCTTGAAGAAGAGAAAATTCGATAAGCTTCATAGCTCCAAGGTTGTTGCAGAAAGTGAAAAGAAAGAGAAGAAGATGAAAGGAAATGGAGAGGAAGGAGAATCCAAAATAACAGAGCAAAATATCTGCAAAGAAACATGTGGAGCTACCTCAAAGGGAAATTCGAAGGTGTCCGAGGTTCAAAAGACGGATTACATCCATGTCCGAGCGCGTCGTGGCCAAGCCACTGATAGCCATAGTCTAGCAGAAAGAGTTAGAAGGGAAAAGATCAGTGAGAGAATGAAGTATTTGCAGGATTTAGTACCAGGTTGTAACAAGATCACAGGAAAAGCTGGAATGCTTGATGAGATCATCAACTATGTTCAATCTCTTCAACGCCAAGTAGAGTTCTTGTCAATGAAATTAGCTACTGTAAACCCAGCACTCGACTTCAACCTGGATGACCTCTTCTCCAAAGAGGTTTTTAGTACTTGTGGTCCCAGTTTTGCATCATTTGGGATGGGATCAGACATGAACAATCCAGCATATCTTCTGTTCAATAATAACTCAGGCCAACAGTTTCCTCCTTCAATCCCAGAAACGTTTCTTGACTCCAGCTGTTTCCATCAAATTCTACCATCCTCTGCTTACGAATCTGATCTTCATAATCTAATGAATGTGGGTTTTGATCAACCAAGAGCATCAAGAGCAGCATCTTTTCTTTCTCAGCCATTGACAGGTGTAGTTGAAGCTAGCCACCATCCAAAGATGGAGATGTAG 1092 0.435 MLRCLNTSGNFTGNCSDMMVLERQSMRMKWQQEQQYHQNQNFYGDSALGEVVAKSIKPEMGQPTFPSFGFGSPGFESSSAISTTSMAAAEETRNGDSVSEKEKMSSASGKQSLKKRKFDKLHSSKVVAESEKKEKKMKGNGEEGESKITEQNICKETCGATSKGNSKVSEVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLATVNPALDFNLDDLFSKEVFSTCGPSFASFGMGSDMNNPAYLLFNNNSGQQFPPSIPETFLDSSCFHQILPSSAYESDLHNLMNVGFDQPRASRAASFLSQPLTGVVEASHHPKMEM 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00207 363 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 185 235 IPR011598 GO:0046983
Accr11g00207 363 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 83 297 IPR024097 GO:0006355
Accr11g00207 363 FunFam Basic helix-loop-helix transcription factor 182 254 - -
Accr11g00207 363 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 183 253 IPR036638 GO:0046983
Accr11g00207 363 MobiDBLite consensus disorder prediction 122 144 - -
Accr11g00207 363 Pfam Helix-loop-helix DNA-binding domain 189 236 IPR011598 GO:0046983
Accr11g00207 363 MobiDBLite consensus disorder prediction 79 144 - -
Accr11g00207 363 Gene3D - 182 254 IPR036638 GO:0046983
Accr11g00207 363 SMART finulus 191 241 IPR011598 GO:0046983
Accr11g00207 363 CDD bHLH_AtBPE_like 175 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00207 Accr-Chr11 2963293 2965401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00207 9 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 42.742 2.07e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr11g00207 HLH 1.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00207 - - pcin:129286940 474.167