Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00171 ATGGCTTCATCTAGTGGAACGTCTTCTGGATCGTCGTCTCTGATTCGAAACTCTGGTTCAGATGAGCACCTGCAGGTGTTGATGGATCAGAGGAAGAGGAAGAGAATGATATCGAATCGTGAATCGGCGAGAAGATCGAGGATGAGGAAACAGAAGCATCTGGATGATCTGGTGGCTCAGGTGGGTCAGCTGAGGAATGAGAATCAGAAGATTCTTGCAACTGTAAATCTCACAACCCAGCAATATCTAACCGTCGAGGCTGAGAATTCTGTGCTCAAAGCCCAAGCCAACGAACTCACACACAGATTGCAATCTCTGAACGAAATTTTGGATTTCGTCAACACAAATTCTGCAGTTTCATCATTATCATCAGCCGCCTTCATGGAATCCACCAACAGCTTCTTCTTCAACAACAACAATCCATTAAACATGGCCTGCCACCTGAACCACCCGATCATGGCTTCTCCTGCTGACATGTTTCATGAGTACTGTTGA 495 0.4586 MASSSGTSSGSSSLIRNSGSDEHLQVLMDQRKRKRMISNRESARRSRMRKQKHLDDLVAQVGQLRNENQKILATVNLTTQQYLTVEAENSVLKAQANELTHRLQSLNEILDFVNTNSAVSSLSSAAFMESTNSFFFNNNNPLNMACHLNHPIMASPADMFHEYC 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00171 164 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Accr11g00171 164 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Accr11g00171 164 MobiDBLite consensus disorder prediction 1 52 - -
Accr11g00171 164 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Accr11g00171 164 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Accr11g00171 164 Gene3D - 29 83 - -
Accr11g00171 164 PANTHER BZIP TRANSCRIPTION FACTOR 44 7 159 - -
Accr11g00171 164 MobiDBLite consensus disorder prediction 1 24 - -
Accr11g00171 164 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Accr11g00171 164 FunFam BZIP transcription factor 29 81 - -
Accr11g00171 164 Coils Coil 89 116 - -
Accr11g00171 164 MobiDBLite consensus disorder prediction 25 52 - -
Accr11g00171 164 Pfam bZIP transcription factor 31 81 IPR004827 GO:0003700|GO:0006355
Accr11g00171 164 Coils Coil 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00171 Accr-Chr11 2326255 2326749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00171 27 155 bZIP Transcription Factor Family AT4G34590 54.478 4.59e-43 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr11g00171 bZIP_1 7.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00171 K25786 - gmx:100101862 186.037