Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00158 ATGGCAACTTATTTGCCAAATTCATATTCTGAGACACCAATTACCTCTAGTAATATAACATTATATATGAACACTGGTTCATATCCAGAAGCATTCTCTGGCAATTCTCAGGAGCAAAATGGCTGCTTTGTGATCCCACCAATGAGTTTATCACAATCAGCCCCAGAACAACAAGAAATCTTAGCGAATCTCGGTGGGTTACAAACTGGGGACTATGATTTCTCTGCGTGGAGACAAGGAAGAAATGAGATGCTAGTAACAAATCCAATGGATGGACATAACATGCAGAGCCAGGGATTATCTCTTAGCCTTGGAACCCAAACACCAACCGGAATCCAAGTTTCTCCTTTCCATGATCAAAGTTCGAATCCGAGTTTTGATTCATTTTTAGGTCAAAATCCATCGATTTCAGGCCATAAAAGCAGTTCATCTAGGCATGAGTGTATGAGGCCCAGTGAAATTTTGCCTCCTGATTTACCTGAAGCTAGTCAAGTTTTGAACAGAGGGGATTATTCTATGCATGGTGGGATGCCAAGTGTTTCAAGAACAATTCCTAATTCCAAGTACCTCAAGGCAGCACAAGAGCTACTTGATGAAGTTGTTGACATCCAAAAAGCAATAAAACAAAGCCCCAGCACACGTGAGAAAAAGACTTCCAAGGAGAATGATGGAAGACTAGAAAATGAAAGTGCACCTGCTGATCGAGAGCCTAACCCTCGAGATTTTGACGGCAACGCCTCTTGTGAGATTTCGAATGCTGAGAGACAAGACCTGCAGAACAAGTTAACAAAGCTACTGTCGATGCTGGATGAGGTTCACAGTAGGTACAAACAATATTATCATCAGATGCAGATTGTGGTATCATCATTTGATGTGATAGCAGGACGTGGTGCGGCCAAACCATACACGGCACTTGCGCTGCAAACCATTTCGCGCCATTTCCGGTGCTTGCATGATGCAATCACTGGGCAGATCAGCGCTACACAGAAGAGCCTTGGAGAGCAAGATTCTGCAGGAAACAATAAAGGAGTTGGAATATCAAGACTCCGGTACGTTGACCAACAAATCCGGCAACAAAGGGCTCTCCAGCAGCTTGGAGTGATGCATCATGCATGGAGGCCACAAAGGGGACTACCAGAAAACTCTGTTTCAATTCTTCGCGCTTGGCTTTTTGAACATTTCCTTCATCCCTATCCCAAAGATTCTGAGAAGGCAATGCTAGCAAGGCAGACAGGTTTGACTAGAAGTCAGGTCTCAAATTGGTTTATAAATGCACGGGTTCGTCTTTGGAAACCTATGATTGAAGAGATGTACAAGGAAGAAATTGAAAATGTGGACCTGCACTCAAGTTCTTCAACTGAAGAAGCATCCAAGGTAAGCAAAAGTGATGTCAAGATCTCCGACGACGGGTGTGATGACTTACAACAAAGCCAAAGTTCTCTAGCCGACAAGAACAGCAAGGACTCGAGATCTGATAAGCAAACTGAGGAGCAACAAAGGCTCAGCTTTGACGACCGTAGTGTCTTCCAAGATGACACAGTTGTTCAGACCAATGAAGGCATCACAGGGTTTGTGGCGGTTGCTCCGGCGTGCCAAATGTCCGAGTTGGGGCGGTTTCAGCCTGGAAACGGCGTGTCACTGACATTAGGACTGCAGCATTGTGAAGTTGGTAATTATATGTCCGGTGAGAGCCGTCATAGCTTCGTTGTTATGAGGGAAGATGGTACCATTGGAGCTCAGACCTCAGAACTTGATTATGTAGCTGCTGGAAACCAGCACCAAAGGTTCACTTCGCCACATTAA 1803 0.447 MATYLPNSYSETPITSSNITLYMNTGSYPEAFSGNSQEQNGCFVIPPMSLSQSAPEQQEILANLGGLQTGDYDFSAWRQGRNEMLVTNPMDGHNMQSQGLSLSLGTQTPTGIQVSPFHDQSSNPSFDSFLGQNPSISGHKSSSSRHECMRPSEILPPDLPEASQVLNRGDYSMHGGMPSVSRTIPNSKYLKAAQELLDEVVDIQKAIKQSPSTREKKTSKENDGRLENESAPADREPNPRDFDGNASCEISNAERQDLQNKLTKLLSMLDEVHSRYKQYYHQMQIVVSSFDVIAGRGAAKPYTALALQTISRHFRCLHDAITGQISATQKSLGEQDSAGNNKGVGISRLRYVDQQIRQQRALQQLGVMHHAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSEKAMLARQTGLTRSQVSNWFINARVRLWKPMIEEMYKEEIENVDLHSSSSTEEASKVSKSDVKISDDGCDDLQQSQSSLADKNSKDSRSDKQTEEQQRLSFDDRSVFQDDTVVQTNEGITGFVAVAPACQMSELGRFQPGNGVSLTLGLQHCEVGNYMSGESRHSFVVMREDGTIGAQTSELDYVAAGNQHQRFTSPH 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00158 600 Pfam Homeobox KN domain 389 428 IPR008422 GO:0003677|GO:0006355
Accr11g00158 600 SUPERFAMILY Homeodomain-like 373 439 IPR009057 -
Accr11g00158 600 ProSiteProfiles 'Homeobox' domain profile. 369 432 IPR001356 GO:0003677
Accr11g00158 600 MobiDBLite consensus disorder prediction 209 242 - -
Accr11g00158 600 Coils Coil 255 275 - -
Accr11g00158 600 MobiDBLite consensus disorder prediction 485 505 - -
Accr11g00158 600 FunFam BEL1-like homeodomain protein 9 375 437 - -
Accr11g00158 600 Gene3D - 368 445 - -
Accr11g00158 600 SMART HOX_1 372 436 IPR001356 GO:0003677
Accr11g00158 600 SMART prehox3 178 323 IPR006563 -
Accr11g00158 600 CDD homeodomain 372 433 IPR001356 GO:0003677
Accr11g00158 600 MobiDBLite consensus disorder prediction 131 159 - -
Accr11g00158 600 MobiDBLite consensus disorder prediction 208 247 - -
Accr11g00158 600 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 117 462 - -
Accr11g00158 600 Pfam Associated with HOX 184 322 IPR006563 -
Accr11g00158 600 MobiDBLite consensus disorder prediction 445 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00158 Accr-Chr11 2089636 2092891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00158 53 598 Homeobox Transcription Factor Family AT4G34610 44.938 4.76e-127 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Accr11g00158 POX 5.9e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00158 - - gmx:100801522 703.36