Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00152 ATGGAAGCTGGACAAGTAGAGAGGAGTAAGTGCCAAGACTGTGGGAACCAAGCGAAGAAAGGTTGTGAGTACAAGAGATGTAGAAGTTGCTGCAACAATAAAGGGTTTGAGTGTGAAACTCATGTTCGCAGCACTTGGGTTCCTCTATATGATAGAAGACGCAATAGGAATCATCATCATCCTCATAATTTCCCTAAAAGGCACAAACACAACAATCCCTATCCCCCACCAGATGAAAAGGAGGAGTTGAAGTTTCCAGAATGGGTGAGTATGAAGGCGACATTTAGGTGCGTACAAGTGCGATCAAAGGATGATTGGGTGAATGAAATTGCGTACCATACTTCAGTGAGGATTGGAGGGCATGTGTTTTGTGGTCTTCTTCATGATCAAGGCCCTTCTCATGGTGGTTTTGGTGAGACTTCTTCAGTTCCTCTTGTTCTTCAGAATAACAACAATCTAAGCGACGTAGCCACTCAGACGAACCATATTGATGCTGTAACATTAATGGCTCCTCCATTATCATCTTCTTCTGCTTCTGACTCTATCTTCCAATATCCACCATATACTTTTACTACCCTACCTCCTATGCCTTATTTCTCCAACCCCCAATCTTAG 615 0.4309 MEAGQVERSKCQDCGNQAKKGCEYKRCRSCCNNKGFECETHVRSTWVPLYDRRRNRNHHHPHNFPKRHKHNNPYPPPDEKEELKFPEWVSMKATFRCVQVRSKDDWVNEIAYHTSVRIGGHVFCGLLHDQGPSHGGFGETSSVPLVLQNNNNLSDVATQTNHIDAVTLMAPPLSSSSASDSIFQYPPYTFTTLPPMPYFSNPQS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00152 204 Pfam Domain of unknown function (DUF702) 9 133 - -
Accr11g00152 204 MobiDBLite consensus disorder prediction 57 80 - -
Accr11g00152 204 NCBIfam putative zinc finger domain, LRP1 type 10 52 IPR006510 -
Accr11g00152 204 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 6 165 IPR007818 GO:0003700|GO:0006355
Accr11g00152 204 NCBIfam LRP1 C-terminal domain 84 132 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00152 Accr-Chr11 1987062 1988285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00152 11 129 C2H2 Transcription Factor Family AT3G51060 46.043 3.48e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Accr11g00152 DUF702 1.1e-16 No_clan