Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00139 ATGGGAGTGTTCACGTACGTCCTCTGTAACTCTGGCGATGAATGGACCGGCAAGCAGCTCACCGGTGACATTGAAGCCTCTGCTTCTTCCAGATTCGAGATTGAGAAGAAGCTTGTCCAATCCACCCTTGCTGTCGATTCCTCTGGACCCGTTCAGTCCTCTTTCTCTTTCGTTACTCCGACTTCCGATGTCTTTCAGGTGATTGTTGGCGGCGCAGCTTTTGTTGGTGGTGCTGTAGCTGCTGCTGCTGCTCCTGCAGCTGCAGGTGGCGATGCTCCGGCTGCTGAGGCCAAGAAAGAAGAAAAGAAGGAAGAAGAAGAAGAGGAGGAAGATGATGACATGGGATTGTCACTTTTTGATTAG 363 0.5124 MGVFTYVLCNSGDEWTGKQLTGDIEASASSRFEIEKKLVQSTLAVDSSGPVQSSFSFVTPTSDVFQVIVGGAAFVGGAVAAAAAPAAAGGDAPAAEAKKEEKKEEEEEEEDDDMGLSLFD 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00139 120 Coils Coil 92 112 - -
Accr11g00139 120 MobiDBLite consensus disorder prediction 86 120 - -
Accr11g00139 120 Pfam 60s Acidic ribosomal protein 51 119 - -
Accr11g00139 120 MobiDBLite consensus disorder prediction 103 120 - -
Accr11g00139 120 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 120 IPR044252 GO:0003735|GO:0005840
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00139 Accr-Chr11 1768716 1769078 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00139 1 69 Cytoplasmic Ribosomal Protein Gene Family AT4G25890 62.319 2.78e-24 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00139 K02942 - qsu:112033161 114.775