Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00117 ATGGGCGATACTGAAGAAGCCCACACTGACATGATGCATAATCTTCAATCCTTGTTCGGAACTTCATCATCTTCGATTCTGAAACAACCTTTAAGCACGGACCAACTCAGTGCACCTCAATTCAACCCCTCACAAATGCGCGCGCGGCATTTTCAGCAGAATTTTGGCGGGGATGGTAATAATAACAAGAGACTCGGCATACCACCGTCACATCCCCACCAGATCCCTCCGATTTCCCCATATTCTCAGATCCCTGTGTCGCGACCCACGTCACAGCAAACTGTTAGCCCAGGACCTACTCATTCGCGATCATTATCACAGCCGCCATTTTTCTCGCTCGATTCTCTGCCTCCCTTAAGCCCCTCTCCTTTTCGAGACTCCACTTCAACTTCCATGTCAGACCCAGCTTCGGCTGATGTATCTATGGAGGATCGGGATGTAAGTTCGCATTCTTTATTGCCACCTTCACCTTTTACAAGGGGTAATCCTTCACGGGTTGGTGAAAGTTTACCCCCACGTAAAGCACATAGGCGCTCTAACAGTGATATACCATTTGGCTTTTCTACTGTAATGCAATCTTCGCCTCCTCTTATTCCACTAAGGGGTTCTGGTGGACTAGATAGGTCATTGTCTGGGAGAGAAAATTCAGGTGCAGGTTTAGCGAAGCCTGCACAATTAGTTAAAAAAGAAACGAGTTGGGACAGAATTGTTGACCACAATATAGAGGGATCAGGTGAGAAGAAATCGCCTGAAGGGGAAGTTGTGGATGATCTTTTCTCTGCGTACATGAACTTAGACAACATTGATGCACTTAACTCTTCGGGGACTGATGACAAAAATGGCAATGAAAATCGTGATGATTTGGATAGTAGAGCGAGTGGAACAAAGATAAATGGAGGTGATAGCAGTGATAATGAAGCAGAAAGCAGTGTCAACGAAACTGGGGCCAATATGCAAAGACAGGGAACCAAATCTTCAAATGAAATGAAGGAAGGGATGAAAAGGAGTGCGGGAGGAGATATTGCACCCACCTCAAGACACTACAGAAGTGTCTCAATGGATAGTTTCATCGGGAAGTTAAACTTTAACGATGACTGCCCTAAACTGCCACCTTCTCCAGGTCCTCGTGCTGGTCAGCTTTCTCCCACCAATTCAATTGATGGTAATTCATCTGCCTTTAGCTTGGAGTTTGGAAATGGGGAATTCAGCGGGTCTGAATTGAAGAAAATTATGGCCAATGAAAAACTTGCTGAGATTGCTTTAACAGACCCTAAGCGAGCAAAAAGGATTTTGGCAAATAGACAATCAGCTGCACGTTCTAAAGAACGGAAGATGCGATACATTTCTGAACTAGAACACAAGGTTCAGACTCTGCAGACTGAAGCTACCACGCTGTCTGCACAACTGACCCTGTTACAGAGAGATTCCGTGGGGCTCACGAACCAGAATAATGAGTTGAAGTTTCGCCTTCAAGCCATGGAACAACAGGCAAAACTCCGAGATGCACTAAATGAAGCTCTAACTGCTGAGGTTCAACGACTTAAAATTGCTACGACTGAGTTGAATGGCGAATCTCATGCTTCTGGCTGCATGATCCCGCAGCATTCTATGAACCCTCAGATGTTTCAGTCGCAGAGGCAGCAATCACAGGCATGCCAATCAAACATTCAGATGCAGCAACTACAGCAGCATCAGCAGAACAGTAGTGCTCCCTCTAAGACCGACTCAAAACAGTAG 1737 0.4571 MGDTEEAHTDMMHNLQSLFGTSSSSILKQPLSTDQLSAPQFNPSQMRARHFQQNFGGDGNNNKRLGIPPSHPHQIPPISPYSQIPVSRPTSQQTVSPGPTHSRSLSQPPFFSLDSLPPLSPSPFRDSTSTSMSDPASADVSMEDRDVSSHSLLPPSPFTRGNPSRVGESLPPRKAHRRSNSDIPFGFSTVMQSSPPLIPLRGSGGLDRSLSGRENSGAGLAKPAQLVKKETSWDRIVDHNIEGSGEKKSPEGEVVDDLFSAYMNLDNIDALNSSGTDDKNGNENRDDLDSRASGTKINGGDSSDNEAESSVNETGANMQRQGTKSSNEMKEGMKRSAGGDIAPTSRHYRSVSMDSFIGKLNFNDDCPKLPPSPGPRAGQLSPTNSIDGNSSAFSLEFGNGEFSGSELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNNELKFRLQAMEQQAKLRDALNEALTAEVQRLKIATTELNGESHASGCMIPQHSMNPQMFQSQRQQSQACQSNIQMQQLQQHQQNSSAPSKTDSKQ 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00117 578 SMART brlzneu 421 485 IPR004827 GO:0003700|GO:0006355
Accr11g00117 578 MobiDBLite consensus disorder prediction 51 226 - -
Accr11g00117 578 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 114 573 - -
Accr11g00117 578 MobiDBLite consensus disorder prediction 182 196 - -
Accr11g00117 578 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 423 486 IPR004827 GO:0003700|GO:0006355
Accr11g00117 578 Gene3D - 424 476 - -
Accr11g00117 578 MobiDBLite consensus disorder prediction 121 137 - -
Accr11g00117 578 MobiDBLite consensus disorder prediction 84 113 - -
Accr11g00117 578 SUPERFAMILY Leucine zipper domain 425 476 IPR046347 GO:0003700|GO:0006355
Accr11g00117 578 MobiDBLite consensus disorder prediction 271 346 - -
Accr11g00117 578 MobiDBLite consensus disorder prediction 364 387 - -
Accr11g00117 578 CDD bZIP_plant_RF2 426 475 IPR044759 GO:0003700|GO:0006355
Accr11g00117 578 Pfam bZIP transcription factor 425 479 IPR004827 GO:0003700|GO:0006355
Accr11g00117 578 Coils Coil 441 496 - -
Accr11g00117 578 Coils Coil 504 524 - -
Accr11g00117 578 MobiDBLite consensus disorder prediction 295 326 - -
Accr11g00117 578 MobiDBLite consensus disorder prediction 540 578 - -
Accr11g00117 578 FunFam probable transcription factor PosF21 424 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00117 Accr-Chr11 1436702 1439977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00117 1 543 bZIP Transcription Factor Family AT4G38900 60.676 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr11g00117 bZIP_1 7.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00117 - - qsa:O6P43_002051 807.364