Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00113 ATGAGAATAAATCCTACCACTTCTGGTCCTGAGGTTTCTGCGCTTGAAAAAAAGAACCTAGGACGTAGCGCTCAAATAATTGGTCCGGTACTGGATGTAGCTTTTCCCCCAGGAAAGATGCCTTATATTTACAACGCTCTGGTAGTTAAGGGTCAAGATACTGTTGGTCAACAAATTAACGTGACTTGTGAAGTACGGCAAGTATTAGGAAATAATCGAGTTAGAGCTGTAGCTATGAGTGCTACAGATGGTCTAATGAGAGGAATGGAAGTGATTGACACGGAAGCTCCTCTAAGTGTTCCAGTCGGCGGAGCAACTCTAGGACGAATTTTCAACGTGCTTGGAGAACCTATTGATAATTTAGGTCCTGTAGATACTCGCACAACATCTCCTATTCATAGATCCGCGCCTGCCTTTATACAGTTAGATACAAAATTATCTATTTTTGAAACAGGAATTAAAGTAGTAGATCTTTTAGCCCCTTATCGCCGTGGAGGAAAAATAGGACTTTTCGGTGGAGCTGGGGTGGGTAAAACAGTACTCATTATGGAATTGATCAATAACATTGCCAAAGCTCATGGGGGTGTATCCGTATTTGGGGGAGTAGGTGAACGTACTCGTGAGGGAAATGATCTTTACATGGAAATGAAAGAATCTGGAGTAATTAATGAACAAAATATTGCAGAATCAAAAGTGGCTCTAGTCTACGGTCAAATGAATGAACCGCTCGGAGCTCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCGGAATATTTCCGAGATGTCAATGAACAAGACGTACTTCTATTTATCGACAATATCTTCCGATTCTTCCAAGCAGGATCCGAAGTATCCGCCTTATTGGGTTGA 873 0.4181 MRINPTTSGPEVSALEKKNLGRSAQIIGPVLDVAFPPGKMPYIYNALVVKGQDTVGQQINVTCEVRQVLGNNRVRAVAMSATDGLMRGMEVIDTEAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPLGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFFQAGSEVSALLG 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00113 290 Gene3D - 18 97 - -
Accr11g00113 290 FunFam AGAP012081-PA 98 217 - -
Accr11g00113 290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 290 IPR027417 -
Accr11g00113 290 FunFam ATP synthase subunit beta, chloroplastic 18 97 - -
Accr11g00113 290 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 20 97 IPR036121 GO:0046034|GO:1902600
Accr11g00113 290 Gene3D - 98 290 IPR027417 -
Accr11g00113 290 PANTHER ATP SYNTHASE 17 290 - -
Accr11g00113 290 Pfam ATP synthase alpha/beta family, beta-barrel domain 25 94 IPR004100 GO:0046034|GO:1902600
Accr11g00113 290 CDD ATP-synt_F1_beta_N 19 98 - -
Accr11g00113 290 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 152 290 IPR000194 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00113 Accr-Chr11 1371343 1372215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00113 98 287 Primary Pumps ATPases(2) AT1G20260 26.636 3.73e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00113 K02112 - ming:20832704 544.658