Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00083 ATGGATTGTACAGCTGCTAGAAAAACTCAAAAGGCTGACAGAGAAAAACTGAGGAGGGACCGGCTCAATGAACAGTTTGTAGAATTGGGTAGCATTTTGGATCCTGATAGGCCCAAAAATGACAAAGCAACCATTCTTGCTGACACAATTCAATTGCTCAAGGACCTTTCTTCGCAAGTTAGTGAACTCAAAGAGGAATATGCTGTGCTGACTGAAGAATCCCAAGAGTTGACTCAGGAGAAAAATGATCTTAGGGAAGAGAAGGCATCTCTTAAATCAGACATTGAGAGCTTGAATAACCAATACCAACAACGACTCAGGACTATGCTCCCTTGGACTGCGATGGATCACTCAGTTATGATGGCTCCTCATTCATATCCATATCCAGTGCCAGTGCCTGTGGCAGTCCCTCCTGGTCCAATTTCCATGCATCCAGCCATGCAGCCATACTCCTTCTTTGCAAATCAAAATCCTGGGGTCATTCCAAATCCATGTTCAACATTCGTTCCTTATCTAGCCCCGAATACTCTTGCTGAACATCAGTCCACACAATATGTAACCCCTCCACTTCCTCCAGGTAGCAATTCCCATGCTTTAGGAACACAAGATTCAAGAAACAAATCACCCAGGGAGAGCAAGGTTGAAAATCATGACTGTGCTAATGATGTCACCACAGACCTGGAGTTGAAAACTCCTGGATCTGCTACTGATCAGGAGTTGTCGTCTAGGCATAGAAAATCCAGCAGGTTGTCCATGAAGGAAAGCAGCTGCACAGAAGGGAGTTCATCTGGTAGGTGTTCTTCTTCTCATAGTGTACAGGATAGCTCATCAAGTAGCGTAGTTGGGAGCAGAAAAGCTGATAAATGA 867 0.4452 MDCTAARKTQKADREKLRRDRLNEQFVELGSILDPDRPKNDKATILADTIQLLKDLSSQVSELKEEYAVLTEESQELTQEKNDLREEKASLKSDIESLNNQYQQRLRTMLPWTAMDHSVMMAPHSYPYPVPVPVAVPPGPISMHPAMQPYSFFANQNPGVIPNPCSTFVPYLAPNTLAEHQSTQYVTPPLPPGSNSHALGTQDSRNKSPRESKVENHDCANDVTTDLELKTPGSATDQELSSRHRKSSRLSMKESSCTEGSSSGRCSSSHSVQDSSSSSVVGSRKADK 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00083 288 MobiDBLite consensus disorder prediction 204 224 - -
Accr11g00083 288 PANTHER TRANSCRIPTION FACTOR BHLH121 2 286 IPR044579 GO:0003700|GO:0006879
Accr11g00083 288 Coils Coil 5 25 - -
Accr11g00083 288 MobiDBLite consensus disorder prediction 183 203 - -
Accr11g00083 288 Gene3D - 4 85 IPR036638 GO:0046983
Accr11g00083 288 Pfam Helix-loop-helix DNA-binding domain 7 56 IPR011598 GO:0046983
Accr11g00083 288 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 56 IPR011598 GO:0046983
Accr11g00083 288 SMART finulus 12 62 IPR011598 GO:0046983
Accr11g00083 288 CDD bHLH_AtILR3_like 11 85 - -
Accr11g00083 288 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 77 IPR036638 GO:0046983
Accr11g00083 288 Coils Coil 46 108 - -
Accr11g00083 288 MobiDBLite consensus disorder prediction 183 288 - -
Accr11g00083 288 MobiDBLite consensus disorder prediction 253 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00083 Accr-Chr11 1131074 1132527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00083 1 249 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 59.200 1.60e-93 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr11g00083 HLH 1.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00083 - - cam:101491902 385.956