Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00071 ATGGCCTCTGGTGCTTCCTTTTATGAGGTGCTAGGGATTTCAACGGGGGCGAGCTGCCAAGAAATAAAGAGTGCCTACAGAAAACTTGCAAGAACATGTCACCCTGACGTGGTGGCCATGAAGCACAAGGCGGATTCGGGCAGCGAGTTCATGAAGATCCACTCGGCCTACTCAACCTTGTCAGACCCTCAGAAGCGTGCTCAATATGACAGACAGCTTTATAGGTACACAAGATCTCCAAACTACTCATCTCTCCCCTGCGAAAATATGGAATCCAGCTTTGGCCATAAATGGGAGACAGATCAGTGTTGGTAA 315 0.4889 MASGASFYEVLGISTGASCQEIKSAYRKLARTCHPDVVAMKHKADSGSEFMKIHSAYSTLSDPQKRAQYDRQLYRYTRSPNYSSLPCENMESSFGHKWETDQCW 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00071 104 ProSiteProfiles dnaJ domain profile. 6 73 IPR001623 -
Accr11g00071 104 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 3 84 - -
Accr11g00071 104 ProSitePatterns Nt-dnaJ domain signature. 50 69 IPR018253 -
Accr11g00071 104 PRINTS DnaJ domain signature 45 65 IPR001623 -
Accr11g00071 104 PRINTS DnaJ domain signature 65 84 IPR001623 -
Accr11g00071 104 PRINTS DnaJ domain signature 8 26 IPR001623 -
Accr11g00071 104 PRINTS DnaJ domain signature 26 41 IPR001623 -
Accr11g00071 104 Pfam DnaJ domain 7 70 IPR001623 -
Accr11g00071 104 SUPERFAMILY Chaperone J-domain 5 76 IPR036869 -
Accr11g00071 104 SMART dnaj_3 5 65 IPR001623 -
Accr11g00071 104 CDD DnaJ 7 62 IPR001623 -
Accr11g00071 104 Gene3D DnaJ domain 1 90 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00071 Accr-Chr11 920788 921102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00071 8 70 C2H2 Transcription Factor Family AT1G74250 46.970 1.03e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00071 - - pcin:129286061 157.532