Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00063 ATGCGGAAAGAGATGTCCTTTCTTGCTCAACCGCGCTGCCTCCTTCTATTCCTTGTTCTTTCAGTTTTTCTGATTTTCGCCTTCTCTGTCACTAAGCGGGTTGAGGAGAAACCAGAAGAGGAACCTGAAATTACACACAAAGTATTTTTGGACATTGATATTGATAACCAACGGTTAGGTAGGATCATTATTGGATTATATGGCCAAGTTGTACCAAAAACAGTGGAGAATTTCAGAGTTTTGTGCACAGGGGAGAAAGGCAAGAGTTCCAATGGCTTGAAACTTCATTATAAGGGAACACTATTTCATCGCATAATATCTGGTTTCGTGATTCAGGGTGGAGACATTTTTCATCAAGATGGCAGAGGATATGAATCTATTTATGGTGGCACCTTTCCTGATGAGAATTTCAAGACAAAACATTCACATGCTGGGGTTGTATCCATGGTGAATTCTGGACCTGATTCCAATGGCTCACAGTTTTTTATCACCACCGTGAAGGCTAGCTGGTTGGATGGAGAACACGTTGTATTTGGGAGGGTAGTAGAAGGTATGGATACTGTGTTTGCTATAGAAGGAGGAGCCGGAACCTACAGTGGCAAACCGAGAAAGAAAGTAGTAATATCTGACTCTGGAGAGATACCTCGGAGCCAGTGGGACGAGCAAGGACGAATCTCCGTATCACAGTGA 690 0.4304 MRKEMSFLAQPRCLLLFLVLSVFLIFAFSVTKRVEEKPEEEPEITHKVFLDIDIDNQRLGRIIIGLYGQVVPKTVENFRVLCTGEKGKSSNGLKLHYKGTLFHRIISGFVIQGGDIFHQDGRGYESIYGGTFPDENFKTKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGRVVEGMDTVFAIEGGAGTYSGKPRKKVVISDSGEIPRSQWDEQGRISVSQ 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00063 229 SUPERFAMILY Cyclophilin-like 44 214 IPR029000 -
Accr11g00063 229 Gene3D - 33 220 IPR029000 -
Accr11g00063 229 FunFam Peptidyl-prolyl cis-trans isomerase 34 220 - -
Accr11g00063 229 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 97 114 IPR020892 GO:0003755|GO:0006457
Accr11g00063 229 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 47 214 - -
Accr11g00063 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 160 172 IPR002130 GO:0000413|GO:0003755
Accr11g00063 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 66 81 IPR002130 GO:0000413|GO:0003755
Accr11g00063 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 188 IPR002130 GO:0000413|GO:0003755
Accr11g00063 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 102 114 IPR002130 GO:0000413|GO:0003755
Accr11g00063 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 145 160 IPR002130 GO:0000413|GO:0003755
Accr11g00063 229 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 49 213 IPR002130 GO:0000413|GO:0003755
Accr11g00063 229 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 52 210 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00063 Accr-Chr11 830626 834351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00063 60 208 U-box Gene Family AT5G67530 44.000 6.76e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00063 - - qsa:O6P43_002110 376.326