Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00058 ATGGGAAGGTCTCCTTGCTGCGAGAAAGCTCACACTAACAAAGGAGCATGGACCAAGGAAGAAGACGATCGCCTCGTTGCTTATATTCGAGCTCACGGCGAGGGCTGCTGGCGTTCTCTCCCCAAGGCCGCCGGACTCCTCCGTTGTGGCAAGAGCTGCCGCCTCCGCTGGATCAACTACCTCCGGCCCGACCTCAAACGCGGCAACTTTACTGAAGAAGAAGATGAGCTCATCATCAAGCTCCATAGCCTCCTTGGCAACAAGTGGTCGCTGATAGCAGGGAGATTACCGGGAAGAACGGACAACGAGATAAAGAATTACTGGAATACTCATATAAGAAGGAAGCTTCTGAGCAGAGGAATCGACCCTACAACTCACAGGCCTCTCAACGACCCTTCTTCTCAGAACCAATCTATTGCTTCATCCGCTTCTGCTGCTCAACATCAAGAGACCAAGTCGTCGGAGATTCTGAACACGGATGCGAGTTCCAAACGACCCGGTGGCGTCTTAGAAGTATGTCCCGACTTGAATCTTGAGCTGACCATCAGCCTTCCTCATCAACATCAGAAGCAACCAGATCATAGTGGGAGCAGTACGGCCGGCGATGGTTACGATTTCCTGGGATTGAAAAGCAGCGTTTTGGATTGCAGGAGCAGCGTAACCCAATTAGATTGGACGACACTCAGAGAATGA 693 0.5166 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPTTHRPLNDPSSQNQSIASSASAAQHQETKSSEILNTDASSKRPGGVLEVCPDLNLELTISLPHQHQKQPDHSGSSTAGDGYDFLGLKSSVLDCRSSVTQLDWTTLRE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00058 230 Gene3D - 14 66 - -
Accr11g00058 230 CDD SANT 69 112 IPR001005 -
Accr11g00058 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr11g00058 230 SMART sant 66 114 IPR001005 -
Accr11g00058 230 SMART sant 13 63 IPR001005 -
Accr11g00058 230 MobiDBLite consensus disorder prediction 127 161 - -
Accr11g00058 230 CDD SANT 16 61 IPR001005 -
Accr11g00058 230 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Accr11g00058 230 Gene3D - 69 155 - -
Accr11g00058 230 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr11g00058 230 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Accr11g00058 230 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr11g00058 230 FunFam MYB-related transcription factor 13 66 - -
Accr11g00058 230 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 179 - -
Accr11g00058 230 MobiDBLite consensus disorder prediction 120 164 - -
Accr11g00058 230 FunFam Myb transcription factor 68 137 - -
Accr11g00058 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr11g00058 230 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00058 Accr-Chr11 782158 783217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00058 1 224 MYB Transcription Factor Family AT4G38620 63.415 3.53e-99 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr11g00058 Myb_DNA-binding 4.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00058 K09422 - jre:109006592 328.561