Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00054 ATGTCAAAACACCAAGACGACCTCGACCTCGATCTCCTCCTTTCCCTTCAAGACAGAGTTTTGGAAACTCCTCCGACTTCTCCCTCACCCCATTCACCGTGTTACTATTCCGACGATGGCTCGCCCAGGCATAAGGAGACGGCTGACATGTCGGTATTCAGAAATGCTGTTCAGGATTGTCTTGAAGACGAAACCAAAGCAAATAAAAAACCTGAGAAGTTGAATGGGCTGGTGAACAAGAAATCAAATCATACCGAGGTCGAGAAATTTTCTGGTCTTCGAATAAGGAACCAATTGGTAACCTCTGCAGAGCTCAGGGAACGCTTTTCAGACATTCGTTTCGTTCGGCTACCAGTAATCAAGAATTTGCTGATGGGGGATACTATTTCTGGATGTTGGGTGACGGTTGGAGTACTGACGGAGAAAGGGAGTTCAAAGACAAGTTCGACAGGGAAGAGCTTCTGTATATGGAAAATTGGGTGTTTGGATGAAAGTAATACTTCTCTTTTCTTGTTTGGAGATGCTTATAAGAGGAACTCGCAAGAACATGCAGGGACGGTCTTTGCATTGATTAACTGTTCAGTACGCAAGGATGCTACGGGTAATGGGTTCTCATTGAGTGCTTTTTCCCCAAGTCAAATTTTGAAGATAGGAACTTCCGTTGATTACGGAGTTTGCAAGGGAAAACGAAAGGACGGGATGCCTTGTACGCTGGTTATAAATAAGCGTCAAGGGATATATTGTAAATATCATAAATCGGGATCAACAAAACAGTACTCCACAATGCGAACTGAACTCAAAGGAGGGAACCTAAGAACAGCATTTAGGCCTACGGATAATCTCAAGTCAGAAGGTATTCACTTAGTTGATCCTGTTATTGGTAAAAGAAACTCAACGAAAACTCAGCCACTGAAATTGCTGTCAGTGGATGCTCTTAAAAAGGCATTGAGCAATGCAGACAAAGTGACAACAAATAATCATTCGCAGGGGATAAGATTTCTTTCGAAGATCACAGGGAAGCCGGAATCTGAGGCATTGAAGAGAAAACAAATGATGCCAAACGAGCAAAGCAAGTGCATTGATAAGAGGAAATCGTCTTCAGTAAACGAGGGATCTCCTGCAACAAGAGACAGACATTTAGGTACCAAAAGAATAAAAGCTGAAGGACAAGCATTGAGTGATAAAACCCCAAGGGGCAGTGCAAAGATGATTGAATTAGACCTTGTTAGCTCTGATGAGGACATCTGA 1248 0.4287 MSKHQDDLDLDLLLSLQDRVLETPPTSPSPHSPCYYSDDGSPRHKETADMSVFRNAVQDCLEDETKANKKPEKLNGLVNKKSNHTEVEKFSGLRIRNQLVTSAELRERFSDIRFVRLPVIKNLLMGDTISGCWVTVGVLTEKGSSKTSSTGKSFCIWKIGCLDESNTSLFLFGDAYKRNSQEHAGTVFALINCSVRKDATGNGFSLSAFSPSQILKIGTSVDYGVCKGKRKDGMPCTLVINKRQGIYCKYHKSGSTKQYSTMRTELKGGNLRTAFRPTDNLKSEGIHLVDPVIGKRNSTKTQPLKLLSVDALKKALSNADKVTTNNHSQGIRFLSKITGKPESEALKRKQMMPNEQSKCIDKRKSSSVNEGSPATRDRHLGTKRIKAEGQALSDKTPRGSAKMIELDLVSSDEDI 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00054 415 FunFam DNA replication licensing factor mcm10 79 253 - -
Accr11g00054 415 MobiDBLite consensus disorder prediction 344 415 - -
Accr11g00054 415 Pfam Primase zinc finger 218 263 IPR015408 GO:0005634|GO:0006260
Accr11g00054 415 PANTHER PROTEIN MCM10 HOMOLOG 37 396 IPR040184 GO:0003690|GO:0003697|GO:0006270
Accr11g00054 415 MobiDBLite consensus disorder prediction 19 46 - -
Accr11g00054 415 MobiDBLite consensus disorder prediction 344 365 - -
Accr11g00054 415 Gene3D - 78 252 IPR012340 -
Accr11g00054 415 MobiDBLite consensus disorder prediction 376 391 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00054 19 414 Core DNA Replication Machinery Family AT2G20980 54.229 3.45e-137 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00054 K10736 - qsa:O6P43_011458 507.294