Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00053 ATGGACGACGGTGAAGTGTTCTCGAGCCCAAACATGGGTGAACTTCCAAGCAGTTGCTCAATGGATGGTTTCTTCGAAGAACTTTTCAAGGATACGCATGCTTGCACTCACACCCACACTTGCAATCCTCCTGGCCCTGATTTTTCACATACCCACACTTGTTATCATGTGCACACCAAAATTCTCCCCGCCCCTGCTGAAGACAAGACCGGGACTGATGACACTGCAGAGTCAGTGGAAAAGAAATCTAAAAAACGTCCTCTTGGTAATCGTGAAGCAGTGCGCAAATATCGTGAGAAAAAGAAAGCCCGTACTGCATCACTGGAGGATGAGGTTGTGAAGTTGAAGGCCTTGAATCAGCATTTAATGAAGAAGTTGCAAGGCCAGGCTGCTCTAGAGGCTGAAATTGCAAGGTTAAAGTGCTTACTTGTGGATATTCGGGGGAGAATTGAAGGGGAGATTGGTTCATTTCCATATCAGAAATCAGCTAATTCGCACCCACCAAATCCAAGCTTGCCTGGTTCATATGTGTTGAATCCTTGTAACATGCAGTGTAATGATTTGGTCTATTGCCTTCGTCCTGGAGCAGAAGGTGAAGCTACTGAAGGCACACAGCTAAACGGGCAAGGGTTTAATGGTTGTGAATTTGAGAGTCTCCAGTGCCTAGCAAGCCATAATATACTTAAAGATATTCCTGGTTGTGGAGCTGGACAGACAGTGCCTAAGGTCAATTCTTCTACAGAAAAAAAGAGCAAAGGGGGGACCCGTGCCAGTGCCTCAAGAGCCTGTTGA 792 0.4621 MDDGEVFSSPNMGELPSSCSMDGFFEELFKDTHACTHTHTCNPPGPDFSHTHTCYHVHTKILPAPAEDKTGTDDTAESVEKKSKKRPLGNREAVRKYREKKKARTASLEDEVVKLKALNQHLMKKLQGQAALEAEIARLKCLLVDIRGRIEGEIGSFPYQKSANSHPPNPSLPGSYVLNPCNMQCNDLVYCLRPGAEGEATEGTQLNGQGFNGCEFESLQCLASHNILKDIPGCGAGQTVPKVNSSTEKKSKGGTRASASRAC 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00053 263 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 80 127 IPR004827 GO:0003700|GO:0006355
Accr11g00053 263 PANTHER CCAAT/ENHANCER BINDING PROTEIN 17 158 IPR031106 GO:0003700|GO:0006351
Accr11g00053 263 MobiDBLite consensus disorder prediction 239 263 - -
Accr11g00053 263 Coils Coil 98 125 - -
Accr11g00053 263 Gene3D - 68 146 - -
Accr11g00053 263 Pfam Basic region leucine zipper 80 135 IPR004827 GO:0003700|GO:0006355
Accr11g00053 263 MobiDBLite consensus disorder prediction 65 101 - -
Accr11g00053 263 CDD bZIP 84 137 - -
Accr11g00053 263 SUPERFAMILY Leucine zipper domain 82 128 IPR046347 GO:0003700|GO:0006355
Accr11g00053 263 MobiDBLite consensus disorder prediction 70 96 - -
Accr11g00053 263 MobiDBLite consensus disorder prediction 239 253 - -
Accr11g00053 263 SMART brlzneu 77 145 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00053 Accr-Chr11 733840 735797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00053 1 260 bZIP Transcription Factor Family AT2G16770 63.258 2.39e-110 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr11g00053 bZIP_2 1.9e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00053 K25785 - jre:108993402 412.149