Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00043 ATGTTATCACAGTTGATGAACTTTCTGAGGACCTGCTTCCGGCCAGGTTCGGATCGATATGCACGAGCAGGTTCAGATGGTGGAGGTAGGCAAGATGGGCTCTTATGGTACAAGGACTCTGGGCAGCATTTAAACGGTGAATTTTCAATGGCTGTGGTCCAAGCCAATAACTTGTTGGAGGATCAGAGCCAGCTTGAATCTGGCAGTTTGAGCTCCCATGAATCTGGCCCTTATGGAACCTTTGTCGGTGTCTATGATGGCCATGGAGGGCCGGAAACATCCCGGTTTATCAACGATCACCTGTTTCACCATCTCAAGAGGTTTACTGCAGAGCAACAATCAATGTCGGTAGATGTAATTCGCAAGGCATTCCAAGCAACAGAAGAAGGATTTATGTCACTTGTGGCCAAACAGTGGCAAATGAAACCGCAAATTGCTGCAGTTGGGTCGTGCTGCCTTGTTGGTGTTATTTGTAATGGTAGCATTTATGTAGCAAATCTTGGTGATTCCCGTGCTGTTTTGGGAAGAGTAGTCAAGGCAACTGGAGAGGTTCTAGCCATGCAATTGTCTACGGAGCACAATGCAGCTTTAGAGTCTGTTAGACAGGAGCTGCACTCTTTGCACCCTGATGATTCAAAGATTGTCGTTTTAAAGCATAATGTGTGGCGAGTGAAGGGCCTTATACAAGTTTCTAGATCTATTGGGGATGTATATTTGAAGAAGGCTGAGTTCAATAGAGAACCTCTATATGCCAAATTTCGACTTCGCGAGCCCTTCAAGAGGCCAATACTGAGCTCAGAACCATCGATATCAGTGTATCAGTTGCAGCCACATGATCAGTTTGTCATATTTGCATCCGATGGACTCTGGGAACACCTTAGCAATCAAGAAGCTGTTGATATAGTACAAAACAATCCCCGCAATGCAAGCGCGAGGAGACTGGTGAAAGCTGCCCTTCAAGAAGCAGCGAAGAAGAGAGAAATGAGGTATTCGGACCTAAAGAAAATTGACCGTGGGGTTCGACGACATTTCCATGATGACATTACTGTGATTGTGGTATTTCTCGACTCAAATCTGGTTAGTAGGGCAAGCTCAGTCAGATTCAACAATATATCAGTTAGAGGGGGTGGCATTACCCTTCCTCCTAACACACTGGCACCATGTGCGACACCAACAGAAGGCATGAGGCTGAGCTTGCTCACATTGTGA 1209 0.4599 MLSQLMNFLRTCFRPGSDRYARAGSDGGGRQDGLLWYKDSGQHLNGEFSMAVVQANNLLEDQSQLESGSLSSHESGPYGTFVGVYDGHGGPETSRFINDHLFHHLKRFTAEQQSMSVDVIRKAFQATEEGFMSLVAKQWQMKPQIAAVGSCCLVGVICNGSIYVANLGDSRAVLGRVVKATGEVLAMQLSTEHNAALESVRQELHSLHPDDSKIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPFKRPILSSEPSISVYQLQPHDQFVIFASDGLWEHLSNQEAVDIVQNNPRNASARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSVRFNNISVRGGGITLPPNTLAPCATPTEGMRLSLLTL 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00043 402 CDD PP2Cc 48 355 IPR001932 -
Accr11g00043 402 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Accr11g00043 402 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Accr11g00043 402 PANTHER PROTEIN PHOSPHATASE 39 353 IPR015655 GO:0004722|GO:0006470
Accr11g00043 402 SMART PP2C_4 39 353 IPR001932 -
Accr11g00043 402 Pfam Protein phosphatase 2C 75 323 IPR001932 -
Accr11g00043 402 SUPERFAMILY PP2C-like 60 356 IPR036457 -
Accr11g00043 402 Gene3D - 37 365 IPR036457 -
Accr11g00043 402 FunFam Phosphatase 2C family protein 36 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00043 Accr-Chr11 642908 647299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00043 1 394 PP2C-type Phosphatase Gene Family AT4G38520 76.904 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00043 - K01102 jre:109006616 694.115