Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00015 ATGGGTTGCTGCCCATCGTCCTTTCTGACCGAAACTCACCCAGAAAAGCAGCAAAATCAACAACCCCCTCACCATGTTCACACTCACAACCACAACCATACCCAACTGCACCCGCCACCCTCTCTCACCGCCGACCTATCCGCCACCGGTGGGGTTCCTTCTTTCTCCGAGTTCTCTTTCTCCGACCTCAAAGCAGCCACCAATAATTTTAGCTCCGACTTTATTGTGTCCGAGAGTGGAGAGAAGGCACCCAACCTTGTGTATAAAGGTCGCCTCCCAAACCGCCGTTGGATTGCCGTCAAGAAGTTCACCAAGGCTGCATGGCCTGATCCCAAGCAATTTGTGGATGAGGCGTCAGGTGTTGGAAAATTGCGACATCGCAGGCTTGCTAATCTGATTGGCTACTGCTGTGATGGAGATGAGAGGCTGCTTGTTGCAGAATACATGCCCAATGACACTCTGGCTAAGCATCTTTTCCACTGGGAAAACCAGACTATTGAGTGGGCCATGCGCTTAAGAGTGGCTTTTTCCATTGCAGAAACTCTAAATTACTGTAGTTCCGAGGGTCGCCCATTATACCATGATTTGAATGCTTACAGGGTTCTTTTTGATGAGGAAGGTGATCCACGTCTATCATGTTTTGGTCTGATGAAGAACAGTAGGGATGGAAAAAGTTATAGCACGAATCTTGCTTACACACCTCCTGAGTACTTAAAAAATGGAAGGGTCACTCCTGAAAGTGTCATTTACAGCTTTGGCACTGTTCTCCTAGACCTACTAAGTGGAAAACACATCCCTCCAAGTCATGGAAAAGCCAACATGCTTCTTATGGATTCACATTTAGAGGGAAAGTTCTCTAAAGAAGAGGCAGCAGTAGTTGTGAATCTGGCCTCTAAATGTTTGCAATATGAACCCAGGGAGCGGCCTGATACAAAGGAATTAGTCACAACACTTGCTCCATTGCAAACAAAACCTGAAGTACCGTCTTACGTTATGCTTGGAATTCCAAAGCATGAGGAAGCTCCATCAACCCCACAACGCCCTCTTTCAGCTATGGGTGAGGCTTGTTCAAGGACGGACCTCACTGCAATACATCAGATCTTGGTCGCAACGCACTACAGAGATGATGAAGGAACTAATGAGTTGTCTTTCCAAGAGTGGACCCAACAGATGAGGGATATGTTGGAAGCAAGGAAGCGTGGAGACTATGCATTCCGTGACAAAGATTTTAAGACAGCAATTGAAAATTATTCACAGTTTATCGATGTGGGAACTATGGTGTCGCCAACGGTTTTTGCTCGGCGCAGTCTGTGCTATCTGTTATGCGATCAACCAGATCCTGCGCTGAGAGATGCAATGCAAGCACAATGTGTTTATCCAGACTGGCCTACAGCATTCTACATGCAATCAGTTGCTCTAGCAAAGCTGGACATGCAAAAGGACGCTGCTGATATGTTGAATGAGGCTACTGCTTTGGAAGAAAAGAGGCAAAGAGGAGGCAGAGGCGCATAA 1512 0.4689 MGCCPSSFLTETHPEKQQNQQPPHHVHTHNHNHTQLHPPPSLTADLSATGGVPSFSEFSFSDLKAATNNFSSDFIVSESGEKAPNLVYKGRLPNRRWIAVKKFTKAAWPDPKQFVDEASGVGKLRHRRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVAFSIAETLNYCSSEGRPLYHDLNAYRVLFDEEGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLKNGRVTPESVIYSFGTVLLDLLSGKHIPPSHGKANMLLMDSHLEGKFSKEEAAVVVNLASKCLQYEPRERPDTKELVTTLAPLQTKPEVPSYVMLGIPKHEEAPSTPQRPLSAMGEACSRTDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIENYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMQKDAADMLNEATALEEKRQRGGRGA 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00015 503 Gene3D Tetratricopeptide repeat domain 392 500 IPR011990 GO:0005515
Accr11g00015 503 FunFam probable serine/threonine-protein kinase At5g41260 150 335 - -
Accr11g00015 503 ProSiteProfiles Protein kinase domain profile. 73 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g00015 503 MobiDBLite consensus disorder prediction 1 48 - -
Accr11g00015 503 MobiDBLite consensus disorder prediction 10 25 - -
Accr11g00015 503 Gene3D Transferase(Phosphotransferase) domain 1 150 335 - -
Accr11g00015 503 Coils Coil 475 495 - -
Accr11g00015 503 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 16 498 IPR045845 GO:0004672|GO:0009742
Accr11g00015 503 FunFam probable serine/threonine-protein kinase At4g35230 45 148 - -
Accr11g00015 503 Pfam Protein tyrosine and serine/threonine kinase 88 318 IPR001245 GO:0004672|GO:0006468
Accr11g00015 503 Gene3D Phosphorylase Kinase; domain 1 47 148 - -
Accr11g00015 503 SUPERFAMILY Protein kinase-like (PK-like) 54 328 IPR011009 -
Accr11g00015 503 FunFam probable serine/threonine-protein kinase At4g35230 392 501 - -
Accr11g00015 503 MobiDBLite consensus disorder prediction 33 48 - -
Accr11g00015 503 SUPERFAMILY TPR-like 395 496 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00015 Accr-Chr11 279406 285387 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00015 10 330 Glycoside Hydrolase AT3G07070 33.333 5.78e-45 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Accr11g00015 PK_Tyr_Ser-Thr 1.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00015 K14500 - zju:125424183 884.019