Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01977 ATGTACTTTAGGAGAATACAATGTCAAGATTGGAGGTGGGGCGTGTTGTTTCAGCCACCCAAATACTTTAGGCCAAGATGCTATGGTCATGCATGCTTTCAACCTCAGTGCCCCAAGACTACTGTGGAAGAATGTGTTTCGCATCATAGCATAATAAGGAGACATCTATTGGAATCTTTTTTATCTAGGGTTGCATCATCTAATAATAATTGTACTGATTTGAACAGAAGGCCTAGTTTATTTTTGAGAAGCACTCAGTTACGCTTCTACAGTTCTGAAAGTGATGGAAGGAATGCAAGTGAGGATAAACATTTAAATGCAAATGATGGAGCTCACTGTGATAAGGGAAAGAACTGGCATGATAAGTTTGGGGAAGATGCGAAACTCTGTAATGCTCATGCTCGACTTGGGGAACAGGATCAAGAGGAGTGGCTCAAGAATGAGAAGATTGCCATTGAAAATAAAAAGAGAGAATCACCCTTTTTGACGAGAAAGGATAAGTTCAAAAATGAGTTTCTGAGAAGGGTTGTTCCTTGGGAGAAAATAAACATTTCATGGGACACATTTCCTTACTATGTTCATGAGAATACCAAAAAACTTCTGGTTGAATGTGCTGCTTCCTATTTGAGACATAATAAGGTTGCTTCTTCTTATGGCACTCGCCTCTCATCTTCAAGTGGGAGGATATTGCTCCAGAGCGTTCCTGGTACTGAGCTCTATCGAGAGAGATTAGTTAGAGCCCTTGCACAAGATCTAAAAGTCCCTTTACTGGTTCTTGATAGCAATATCCTTGCTCCTTATTATATTGATGATGACTTATCATCGTCAGATTGTGAGTCTGATGATGATAGTGCAGAATCTGGAGAGGAGGCTTCTATGGAGTCAGAGAATGAAGATGATAACAATGCAAGCAATGAAGAAGAGTGGACTAGCAGTACTGAGGCAAAGTCAGATGCTAGTGATAACGAAGAACATGATGCAATAGCAACTGCTGAGGCAGCCCTTAAGAAGGTGAAAGCTGCTGTTCAGAAACTTGTTCCCTACAACATTGAAGACTTTGAAAAGAGGTCATCTGAAGAGTCAGAAAGTTCTGAGTCAACCAAATCTGAGGTTGTGAAGCCTTCCGACCACCAATCTGGATGCCAATTAAAGAAAGGTGACCGTGTGAAATACATTGGGCCGTCTGTTCAAATGAAAGACAACAATAGATCTTTGTCCAATGGTCAACGGGGAGAGGTATATGAGGTGGAGGGGGATCAAATTGCTGTCATCATGGACATCAGCGAAGATAATATAAAGGATGGTGAGATGGAGAAATCTAATGAACATACAGAATCCCGACTTTGTTGGATACATGTTAAGGACATTGAGCATGATCTTGATGCTCAAATACAGGATTGCTACATAGCTATGGAGGCTCTATGCGAGGTTTTGGATTCCAAACAACCCCTTATTGTCTATTTTCCAGACAGTACACAGTGGTTTCATAAATCAGTCGTGAAGTCAAACAGAAAAGAGTTCTTTCATAAGGTTCAAGAAATGTTTCACAAGTTGTCTGGACCAGTTGTGTTGATTTGTGGACAAAACAAAATTCAATCAGGATCAAAAGAGAAAAAGCAATTTACAATGATACTTCCAAACTTTGGACGCGTGGGTAAGCTGCCTCTTTCTCTGAAACACTTGACTGAGGGACTTGGAGCAACGAAGAGACTGGATGATGATGATGAAATCCACAAGCTTTTCACTAATGTTTTGTGCATAAATCCGCCTAAGGAGGAGGATCAGCTTGGAACTTTCAAAAAACAACTTGAGGAAGACAGGAAAATTGTGATTTCACGTACTAGTTTGAATGAACTACACAAGGTTCTTGAAGAACATGAGCTATCATGCTTGGACCTCTTGCAAGTAAATACCCATGATCTCATTCTGACAAAGCAAAAAGCTGAAAAGGTGGTGGGCTGGGCCAAAAATAATTATTTGTCATCTTGCGCACTTCCTTATGTTAAAGGAGAAAGATTATGCCTGCCTCGTGAAAGTCTTGAAACTGCAATCTCAAGATTGAGGGATCAAGAAACTATGTCACGGAAGCCCTCTCAGGGTCTGAAGAACCTTGCTAAGGATGAGTATGAGAGCAACTTTATCTCGGCTGTAGTACCTCCTGGTGAAATTGGGGTGAAGTTTGATGACGTAGGTGCTCTTGAAGATGTGAAGAAGGCACTTAATGAACTCGTCATCCTTCCAATGAGAAGGCCAGAGCTTTTCTCTCGTGGAAACTTGTTACGGCCTTGCAAAGGAATATTACTTTTTGGTCCTCCTGGCACTGGGAAAACTCTTCTGGCCAAGGCACTTGCAACAGAAGCAGGCGCAAATTTTATCAGCATAACTGGTTCAACTCTAACATCAAAGTGGTTTGGAGATGCTGAGAAACTTACCAAAGCCCTTTTCTCCTTTGCTAGCAAGCTTGCTCCTGTCATTATATTTGTTGATGAAGTTGATAGTTTGCTTGGTGCTCGAGGGGGTGCTTTTGAGCATGAAGCCACTAGAAGAATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGGACAAAAGAGAGTCAAAGAATCCTCATTCTTGGTGCAACAAACAGGCCTTTTGATCTTGATGATGCTGTTATACGCCGCTTACCAAGAAGGATATATGTGGATTTGCCAGATGCTGAAAATCGGATGAAGATTTTAAGAATCTTCCTTGCACAAGAAAATCTTGATCTTGATTTTCAGTTTAACAAACTCGCTAACTTGACTGAGGGATACTCTGGCAGTGATCTGAAGAACCTTTGCATTGCTGCGGCATATAGACCTGTTCAAGAGCTTCTAGAGAATGAAAAGAAGGCGAGCTACAGTGACTTAAGACCGACATTAAGGCCTCTAAAATTGGATGATTTTATTCAGGCAAAATCTAAGGTTGGGCCATCAGTTGCGTATGATGCAGCAAGCATGAATGAGTTGAGGAAGTGGAATGAAATGTACGGAGAAGGTGGAAGCAGGACAAAATCTCCATTTGGATTTGGAAGCTGA 3060 0.4134 MYFRRIQCQDWRWGVLFQPPKYFRPRCYGHACFQPQCPKTTVEECVSHHSIIRRHLLESFLSRVASSNNNCTDLNRRPSLFLRSTQLRFYSSESDGRNASEDKHLNANDGAHCDKGKNWHDKFGEDAKLCNAHARLGEQDQEEWLKNEKIAIENKKRESPFLTRKDKFKNEFLRRVVPWEKINISWDTFPYYVHENTKKLLVECAASYLRHNKVASSYGTRLSSSSGRILLQSVPGTELYRERLVRALAQDLKVPLLVLDSNILAPYYIDDDLSSSDCESDDDSAESGEEASMESENEDDNNASNEEEWTSSTEAKSDASDNEEHDAIATAEAALKKVKAAVQKLVPYNIEDFEKRSSEESESSESTKSEVVKPSDHQSGCQLKKGDRVKYIGPSVQMKDNNRSLSNGQRGEVYEVEGDQIAVIMDISEDNIKDGEMEKSNEHTESRLCWIHVKDIEHDLDAQIQDCYIAMEALCEVLDSKQPLIVYFPDSTQWFHKSVVKSNRKEFFHKVQEMFHKLSGPVVLICGQNKIQSGSKEKKQFTMILPNFGRVGKLPLSLKHLTEGLGATKRLDDDDEIHKLFTNVLCINPPKEEDQLGTFKKQLEEDRKIVISRTSLNELHKVLEEHELSCLDLLQVNTHDLILTKQKAEKVVGWAKNNYLSSCALPYVKGERLCLPRESLETAISRLRDQETMSRKPSQGLKNLAKDEYESNFISAVVPPGEIGVKFDDVGALEDVKKALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRTKESQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILRIFLAQENLDLDFQFNKLANLTEGYSGSDLKNLCIAAAYRPVQELLENEKKASYSDLRPTLRPLKLDDFIQAKSKVGPSVAYDAASMNELRKWNEMYGEGGSRTKSPFGFGS 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01977 1019 Pfam ATPase family associated with various cellular activities (AAA) 766 896 IPR003959 GO:0005524|GO:0016887
Accr10g01977 1019 MobiDBLite consensus disorder prediction 274 305 - -
Accr10g01977 1019 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 167 1012 - -
Accr10g01977 1019 MobiDBLite consensus disorder prediction 354 372 - -
Accr10g01977 1019 MobiDBLite consensus disorder prediction 354 386 - -
Accr10g01977 1019 Pfam AAA+ lid domain 919 954 IPR041569 -
Accr10g01977 1019 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 724 954 IPR027417 -
Accr10g01977 1019 Gene3D - 898 983 - -
Accr10g01977 1019 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 724 900 - -
Accr10g01977 1019 Gene3D - 725 1001 IPR027417 -
Accr10g01977 1019 MobiDBLite consensus disorder prediction 274 324 - -
Accr10g01977 1019 SMART AAA_5 762 899 IPR003593 GO:0016887
Accr10g01977 1019 ProSitePatterns AAA-protein family signature. 869 888 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01977 Accr-Chr10 44324843 44343439 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01977 725 967 Calmodulin-binding Proteins AT3G56690 38.492 6.63e-42 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01977 - - gmx:100812718 1495.72