Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01976 ATGTACTTTAGGAGAATACAATGTCAAGATTGGAGGTGGGGCGTGTTGTTTCAGCCACCCAAATACTTTAGGCCAAGATGCTATGGTCATGCATGCTTTCAACCTCAGTGCCCCAAGACTACTGTGGAAGAATGTGTTTCGCATCATAGCATAATAAGGAGACATCTATTGGAATCTTTTTTATCTAGGGTTGCATCATCTAATAATAATTGTACTGATTTGAACAGAAGGCCTAGTTTATTTTTGAGAAGCACTCAGTTACGCTTCTACAGTTCTGAAAGTGATGGAAGGAATGCAAGTGAGGATAAACATTTAAATGCAAATGATGGAGCTCACTGTGATAAGGGAAAGAACTGGCATGATAAGTTTGGGGAAGATGCGAAACTCTGTAATGCTCATGCTCGACTTGGGGAACAGGATCAAGAGGAGTGGCTCAAGAATGAGAAGATTGCCATTGAAAATAAAAAGAGAGAATCACCCTTTTTGACGAGAAAGGATAAGTTCAAAAATGAGTTTCTGAGAAGGGTTGTTCCTTGGGAGAAAATAAACATTTCATGGGACACATTTCCTTACTATGTTCATGAGAATACCAAAAAACTTCTGGTTGAATGTGCTGCTTCCTATTTGAGACATAATAAGGTTGCTTCTTCTTATGGCACTCGCCTCTCATCTTCAAGTGGGAGGATATTGCTCCAGAGCGTTCCTGGTACTGAGCTCTATCGAGAGAGATTAGTTAGAGCCCTTGCACAAGATCTAAAAGTCCCTTTACTGGTTCTTGATAGCAATATCCTTGCTCCTTATTATATTGATGATGACTTATCATCGTCAGATTGTGAGTCTGATGATGATAGTGCAGAATCTGGAGAGGAGGCTTCTATGGAGTCAGAGAATGAAGATGATAACAATGCAAGCAATGAAGAAGAGTGGACTAGCAGTACTGAGGCAAAGTCAGATGCTAGTGATAACGAAGAACATGATGCAATAGCAACTGCTGAGGCAGCCCTTAAGAAGGTGAAAGCTGCTGTTCAGAAACTTGTTCCCTACAACATTGAAGACTTTGAAAAGAGGTCATCTGAAGAGTCAGAAAGTTCTGAGTCAACCAAATCTGAGGTTGTGAAGCCTTCCGACCACCAATCTGGATGCCAATTAAAGAAAGGTGACCGTGTGAAATACATTGGGCCGTCTGTTCAAATGAAAGACAACAATAGGATCATACTGGGGAAGATTCTGACATCTGATGGTCCAACTAATGCTTACACTAATATCCATGGCAGATCTTTGTCCAATGGTCAACGGGGAGAGGTATATGAGGTGGAGGGGGATCAAATTGCTGTCATCATGGACATCAGCGAAGATAATATAAAGGATGGTGAGATGGAGAAATCTAATGAACATACAGAATCCCGACTTTGTTGGATACATGTTAAGGACATTGAGCATGATCTTGATGCTCAAATACAGGATTGCTACATAGCTATGGAGGCTCTATGCGAGGTTTTGGATTCCAAACAACCCCTTATTGTCTATTTTCCAGACAGTACACAGTGGTTTCATAAATCAGTCGTGAAGTCAAACAGAAAAGAGTTCTTTCATAAGGTTCAAGAAATGTTTCACAAGTTGTCTGGACCAGTTGTGTTGATTTGTGGACAAAACAAAATTCAATCAGGATCAAAAGAGAAAAAGCAATTTACAATGATACTTCCAAACTTTGGACGCGTGGGTAAGCTGCCTCTTTCTCTGAAACACTTGACTGAGGGACTTGGAGCAACGAAGAGACTGGATGATGATGATGAAATCCACAAGCTTTTCACTAATGTTTTGTGCATAAATCCGCCTAAGGAGGAGGATCAGCTTGGAACTTTCAAAAAACAACTTGAGGAAGACAGGAAAATTGTGATTTCACGTACTAGTTTGAATGAACTACACAAGGTTCTTGAAGAACATGAGCTATCATGCTTGGACCTCTTGCAAGTAAATACCCATGATCTCATTCTGACAAAGCAAAAAGCTGAAAAGGTGGTGGGCTGGGCCAAAAATAATTATTTGTCATCTTGCGCACTTCCTTATGTTAAAGGAGAAAGATTATGCCTGCCTCGTGAAAGTCTTGAAACTGCAATCTCAAGATTGAGGGATCAAGAAACTATGTCACGGAAGCCCTCTCAGGGTCTGAAGAACCTTGCTAAGGATGAGTATGAGAGCAACTTTATCTCGGCTGTAGTACCTCCTGGTGAAATTGGGGTGAAGTTTGATGACGTAGGTGCTCTTGAAGATGTGAAGAAGGCACTTAATGAACTCGTCATCCTTCCAATGAGAAGGCCAGAGCTTTTCTCTCGTGGAAACTTGTTACGGCCTTGCAAAGGAATATTACTTTTTGGTCCTCCTGGCACTGGGAAAACTCTTCTGGCCAAGGCACTTGCAACAGAAGCAGGCGCAAATTTTATCAGCATAACTGGTTCAACTCTAACATCAAAGTGGTTTGGAGATGCTGAGAAACTTACCAAAGCCCTTTTCTCCTTTGCTAGCAAGCTTGCTCCTGTCATTATATTTGTTGATGAAGTTGATAGTTTGCTTGGTGCTCGAGGGGGTGCTTTTGAGCATGAAGCCACTAGAAGAATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGGACAAAAGAGAGTCAAAGAATCCTCATTCTTGGTGCAACAAACAGGCCTTTTGATCTTGATGATGCTGTTATACGCCGCTTACCAAGAAGGATATATGTGGATTTGCCAGATGCTGAAAATCGGATGAAGATTTTAAGAATCTTCCTTGCACAAGAAAATCTTGATCTTGATTTTCAGTTTAACAAACTCGCTAACTTGACTGAGGGATACTCTGGCAGTGATCTGAAGAACCTTTGCATTGCTGCGGCATATAGACCTGTTCAAGAGCTTCTAGAGAATGAAAAGAAGGCGAGCTACAGTGACTTAAGACCGACATTAAGGCCTCTAAAATTGGATGATTTTATTCAGGCAAAATCTAAGGTTGGGCCATCAGTTGCGTATGATGCAGCAAGCATGAATGAGTTGAGGAAGTGGAATGAAATGTACGGAGAAGGTGGAAGCAGGACAAAATCTCCATTTGGATTTGGAAGCTGA 3126 0.4136 MYFRRIQCQDWRWGVLFQPPKYFRPRCYGHACFQPQCPKTTVEECVSHHSIIRRHLLESFLSRVASSNNNCTDLNRRPSLFLRSTQLRFYSSESDGRNASEDKHLNANDGAHCDKGKNWHDKFGEDAKLCNAHARLGEQDQEEWLKNEKIAIENKKRESPFLTRKDKFKNEFLRRVVPWEKINISWDTFPYYVHENTKKLLVECAASYLRHNKVASSYGTRLSSSSGRILLQSVPGTELYRERLVRALAQDLKVPLLVLDSNILAPYYIDDDLSSSDCESDDDSAESGEEASMESENEDDNNASNEEEWTSSTEAKSDASDNEEHDAIATAEAALKKVKAAVQKLVPYNIEDFEKRSSEESESSESTKSEVVKPSDHQSGCQLKKGDRVKYIGPSVQMKDNNRIILGKILTSDGPTNAYTNIHGRSLSNGQRGEVYEVEGDQIAVIMDISEDNIKDGEMEKSNEHTESRLCWIHVKDIEHDLDAQIQDCYIAMEALCEVLDSKQPLIVYFPDSTQWFHKSVVKSNRKEFFHKVQEMFHKLSGPVVLICGQNKIQSGSKEKKQFTMILPNFGRVGKLPLSLKHLTEGLGATKRLDDDDEIHKLFTNVLCINPPKEEDQLGTFKKQLEEDRKIVISRTSLNELHKVLEEHELSCLDLLQVNTHDLILTKQKAEKVVGWAKNNYLSSCALPYVKGERLCLPRESLETAISRLRDQETMSRKPSQGLKNLAKDEYESNFISAVVPPGEIGVKFDDVGALEDVKKALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRTKESQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILRIFLAQENLDLDFQFNKLANLTEGYSGSDLKNLCIAAAYRPVQELLENEKKASYSDLRPTLRPLKLDDFIQAKSKVGPSVAYDAASMNELRKWNEMYGEGGSRTKSPFGFGS 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01976 1041 MobiDBLite consensus disorder prediction 354 387 - -
Accr10g01976 1041 MobiDBLite consensus disorder prediction 274 305 - -
Accr10g01976 1041 SMART AAA_5 784 921 IPR003593 GO:0016887
Accr10g01976 1041 MobiDBLite consensus disorder prediction 354 372 - -
Accr10g01976 1041 Gene3D - 920 1005 - -
Accr10g01976 1041 Gene3D - 747 1023 IPR027417 -
Accr10g01976 1041 Pfam ATPase family associated with various cellular activities (AAA) 788 918 IPR003959 GO:0005524|GO:0016887
Accr10g01976 1041 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 746 922 - -
Accr10g01976 1041 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 167 1034 - -
Accr10g01976 1041 MobiDBLite consensus disorder prediction 274 324 - -
Accr10g01976 1041 Pfam AAA+ lid domain 941 976 IPR041569 -
Accr10g01976 1041 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 746 976 IPR027417 -
Accr10g01976 1041 ProSitePatterns AAA-protein family signature. 891 910 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01976 Accr-Chr10 44324843 44343439 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01976 747 989 Calmodulin-binding Proteins AT3G56690 38.492 5.85e-42 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01976 - - gmx:100802939 1520.37