Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01959 ATGACTCACGAAAGCAAGCGGCTGGAGAATGACGACACGCGTCCACCGCCGCAGTATTACAATTCTGAGAAGCAAGACGGCGATGATGAAGAGGGCATGCGGCGGAAGGATCGTTCCGAGAATCAGCCTTCGGCGGAAGACAGCGATGAAGGAGAAAGGGGTGTAAAGCAAGAAAGCCTCTATCTTGATACTGAACAAGCAAAATTCCGGTTTAACCAAGAAAGTTTCGATATTGACTCCGAACAAGTGAAAATCGGGTTAAAGCAAGAAAATTTCGATCTTGAACTTGACACCGAACAAGAGAAAATCGACCACTTAACGGAAGGCACCGAAAGTGTCAAGAAAAGACGCGGCAGAAAGCGTAAGTCAGAGACGGAGGCCTCTGGGAACGAGGTTTCGGCAGAGGCGACGAGGCGTAGTGCTAGAGCATCGCAGAAATCGTCCCGTCCTGTTTACTTTCACGACGACGAAGACGAACCTAGAAAAAGGAAACGTAGGAGAGGTCGTAAGAAGACAAAAATTGAAGAAGCTGCAGGAGCGGAGCACAATGGTGATTTAGCTGTGGAGAAGTTAGGACATTTGAAGCAGAGTGATCCTGGGGTTTCCTCGGAGGACTATGGTCTCGAAGAAGTAGACAGCGGAGATAAGAAAATTCCAAGGCGGGGGAAGCTGGCTCAAAACGCGAAGGCAGAACACGTAATATCGGATGATCATGGTTCAATGAGAACGGTTAGGGATTCTTCAGAAAGCAGATCGACTAAAGGCTATAGTTTGAGGGCTTCTAAATCTGAAGTTAAGAAGCAGGAGACGAACAAAATAAACAAGCATGATCCTGAATGGATTGAAAAGGTGTCCTTAATGTGCCATCAGTGTCAGAGAAATGATAAGGGGGAGGTTGTTAGGTGTACAAAATGTAAGCGGAAAAGATTTTGCATCCCGTGTTTACAGAGTTGGTATCCTCAACTGAGAGAGGAAGACATTGCTGAGGAGTGTCCGGTGTGCCGTGGAAACTGCAATTGCAAAGCATGTCTGAAATCTGATAAATTAATTACAACAATGAAGAACAAAGCAAAAGAGAAGAATAAAGAAAAACATGTCACAACTGAGGAAGTTGAATACTATAAGTATTTGCTATCTGTGCTTCTTCCATATTTAAGGCAGCTAAATGAAGAACAAATGATGGAGAAGGAGATTGAAGCTAAGAGACAAGGCGTTTCACTTTCAGAGATCCAGGTAGGAAGGACAGATTGCACAGATAATGAGCGTGTTTACTGTGACAATTGTAAAACTTCAATTTTTGATTGTCACCGAAGCTGTCAAGAATGTTCTTTAGACCTCTGTCTGGTCTGTTGCCGTGAGATTCGTCAGGGGCAATTGGTTGGAGGTGCAGAGCCAATTGAGTCTGAGTTTATCAGCTGGGGGCTAAAATATATGCATGGTGGGGAAAAGGAGTTAAGAACAATTAAATTAAATGTTGAGACGAAGAGTGAGGATCGTGATTGGTCCAGATCTTGTTTGAAAGTGACAAGTGATGGTAGCATCTCTTGTCCAAGGGATCATGGTGGTTGTGGTTATCTTGGACTTCGATGTGTATTTCCTGATAACTGGATTTCTGAACTTGTAAAGAAAGCAGAAGATATGGCCAAAGTGTATAAGCTTGATGATGCAACCCAGAAAAGTAACCAGTGGTGTTCATGTTTCAACCTAGATGGCATCAAAAACAATGTTGGAAATGAGAATAAGAGGAAGGCTGCTTCTCGTGAAGATCCCAATGTTACTGACAACTATATATACTGTCCAAGGGCTGTAGATTTAGGACCGTTGGACCTGAAGCATTTTCAGTGGCACTGGAGTAAAGGAGAGCCAGTGATTGTCAGCAATGTGCTCGAATGTACATCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTCCGTAAGATGACTAGTACCAAGCACAATCAACATTTGGAAGTGAAGGTCCTTGATTGCTTGGACTGGTGTGAGGGAGACATCAATATCCACCAATTCTTTACAGGGTACACAGAAGGTCGAAAAGATTTTGCTATGGGGCCTCAGTTATTGAAATTGAAAGATTGGCCTCCTTCAAATTTATTTGAGGAACGATTACCACGTCATTGCGCCGAGTTCATTTCTTCCTTACCGTACAAGGAATATACAAATCCTCATAACGGTGTTCTGAACCTTTATTCAATGTTGCCAGACGAGTGTATAAAGCCGGATATTGGTCCAAAGACATATATAGCATATGGAATTCCTATGGAGCTTGGGCGGGGTGATTCAGTGACAAAGCTTCATTGTGACATGTCTGATGCAGTGAATGTTTTGACTCATACTTTTGAGACGCCCCTTGATGCTAGTCTCCTTGCAACAATAGAGGATTTGAAAAAAAAACACCTTGAACAAGACAGGGAGGATCTACATGGTGATTTGCAAGAAGCGGAAGCTAATGATGAAAATGAAAATACTACAGTTTTTGAAAATAAGTTTGTTGGATATGAATCTGTTGAGGGAGGTGCTCTCTGGGATATTTTTAGGAGACAGGATGTCCCCAAACTGCAGGAATACCTTAAGAAGCACGTAAAAGAATTCAGGCATGTCAACTGCATTCCATTGCGGGAGGTTGTCCATCCCATCCATGATCAGACCTTTTATTTGACTATGGATCATAAGAGGAAGCTGAAGGAGGAATATGGAATAGAACCATGGACATTTGTTCAGAAATTGGGAGACGCAGTTTTGATTCCTGCTGGTTGTCCTCACCAAGTCAGAAATCTCAAGTCATGCATCAAGGTTGCTCTCGATTTTGTGTCACCTGAAAGCATAGATGAGTGTTTTCGTTTAACACAGGAATTTCGCACACTTCCCATCAATCACAGGGCTATTGAGGACAAATTGGAGGTCAAAAAAATGCTCATTCATGCAATGAGCAACGTAGTGGGGAAATTGGAGGGAGCAAGGAAGATTGAAGATAATGCTCAATTGCAAGCAGGATCTTCCTAA 3027 0.4301 MTHESKRLENDDTRPPPQYYNSEKQDGDDEEGMRRKDRSENQPSAEDSDEGERGVKQESLYLDTEQAKFRFNQESFDIDSEQVKIGLKQENFDLELDTEQEKIDHLTEGTESVKKRRGRKRKSETEASGNEVSAEATRRSARASQKSSRPVYFHDDEDEPRKRKRRRGRKKTKIEEAAGAEHNGDLAVEKLGHLKQSDPGVSSEDYGLEEVDSGDKKIPRRGKLAQNAKAEHVISDDHGSMRTVRDSSESRSTKGYSLRASKSEVKKQETNKINKHDPEWIEKVSLMCHQCQRNDKGEVVRCTKCKRKRFCIPCLQSWYPQLREEDIAEECPVCRGNCNCKACLKSDKLITTMKNKAKEKNKEKHVTTEEVEYYKYLLSVLLPYLRQLNEEQMMEKEIEAKRQGVSLSEIQVGRTDCTDNERVYCDNCKTSIFDCHRSCQECSLDLCLVCCREIRQGQLVGGAEPIESEFISWGLKYMHGGEKELRTIKLNVETKSEDRDWSRSCLKVTSDGSISCPRDHGGCGYLGLRCVFPDNWISELVKKAEDMAKVYKLDDATQKSNQWCSCFNLDGIKNNVGNENKRKAASREDPNVTDNYIYCPRAVDLGPLDLKHFQWHWSKGEPVIVSNVLECTSGLSWEPLVMWRAFRKMTSTKHNQHLEVKVLDCLDWCEGDINIHQFFTGYTEGRKDFAMGPQLLKLKDWPPSNLFEERLPRHCAEFISSLPYKEYTNPHNGVLNLYSMLPDECIKPDIGPKTYIAYGIPMELGRGDSVTKLHCDMSDAVNVLTHTFETPLDASLLATIEDLKKKHLEQDREDLHGDLQEAEANDENENTTVFENKFVGYESVEGGALWDIFRRQDVPKLQEYLKKHVKEFRHVNCIPLREVVHPIHDQTFYLTMDHKRKLKEEYGIEPWTFVQKLGDAVLIPAGCPHQVRNLKSCIKVALDFVSPESIDECFRLTQEFRTLPINHRAIEDKLEVKKMLIHAMSNVVGKLEGARKIEDNAQLQAGSS 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01959 1008 Coils Coil 805 825 - -
Accr10g01959 1008 MobiDBLite consensus disorder prediction 98 186 - -
Accr10g01959 1008 Pfam JmjC domain, hydroxylase 848 944 IPR003347 -
Accr10g01959 1008 SUPERFAMILY Clavaminate synthase-like 606 983 - -
Accr10g01959 1008 MobiDBLite consensus disorder prediction 129 147 - -
Accr10g01959 1008 SMART cupin_9 711 961 IPR003347 -
Accr10g01959 1008 MobiDBLite consensus disorder prediction 149 163 - -
Accr10g01959 1008 MobiDBLite consensus disorder prediction 1 61 - -
Accr10g01959 1008 MobiDBLite consensus disorder prediction 238 272 - -
Accr10g01959 1008 MobiDBLite consensus disorder prediction 98 114 - -
Accr10g01959 1008 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 21 995 IPR045109 GO:0032454|GO:0033169
Accr10g01959 1008 ProSiteProfiles Zinc finger RING-type profile. 288 335 IPR001841 -
Accr10g01959 1008 FunFam Transcription factor jumonji domain-containing protein 594 970 - -
Accr10g01959 1008 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 285 359 IPR018866 -
Accr10g01959 1008 MobiDBLite consensus disorder prediction 196 215 - -
Accr10g01959 1008 MobiDBLite consensus disorder prediction 172 186 - -
Accr10g01959 1008 Gene3D Cupin 603 970 - -
Accr10g01959 1008 MobiDBLite consensus disorder prediction 23 59 - -
Accr10g01959 1008 ProSiteProfiles JmjC domain profile. 730 961 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01959 Accr-Chr10 44082692 44100674 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Accr10g01959 JmjC 1.8e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01959 K15601 - mnt:21406437 932.169