Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01942 ATGGTTGGAAGTCTTGAAATCGGAGCTGTACCTTTCAATCCAGATGGATGGGGTCCACCTGACGCCGCCGCGTCTTCCGCCAGCAACCTCCCGGTGAATATACCCTACGCCCCATTCTCTCGCTCAGACAAACTAGGTCGAATCGCTGACTGGACCCGCAACTTCAACAACCCTGCACGACCCAAGAACTCGGCTGACGCTGCATTCGACTTCACCATCGACGATTCCTTCCCTGCCTCTGCTGATGATGATTCCTCCTTCCGCCTCATCGATGGAAAGCCCCCTCCGCGACCCAAGTTTGGTCCTAAATGGCGGTTCCAGCAGCAGCGACAGCTCCCTCAACGCCGTGACGAGGAGGTGGAGGCCCGAAAACGTGAGGCTGAGAAGGAGAGGGCGCGCCGCGACCGTCTCTACCATCTCAATAGATCCAACGCGAATGCCTCACGTCGTGAAGCCGCGGTCTTCAAATCCTCTGTGGATATTCAGCCCGAGTGGAACATGCTGGATCAGATCCCATTCTCAACTTTTTCAAAGTTATCCTTCGCTGTTCCGGAACCCGAAGACCTTCTTCTCTGTGGAGGGCTTGAGTATTATGACAGGTCATATGATAGGATTACTCCCAAGAACGAACGTCGTCTCGAGAGGTTTAAGAATAGGAACTTTTTCAAAGTTACTACCACTGACGACCCAGTGATCCGAAGGCTTGCTAACGAGGACAAAGCCACTGTTTTTGCCACCGATACTATTCTTTCAACGCTCATGTGTGCACCCAGGTCTGTTTACTCATGGGACATTGTTATTCAGCGAGTTGGGAATAAGTTGTTTTTTGATAAGAGGGATGGATCGCAGTTGGATTTGCTGTCCGTCCATGAAACCTCGCAGGAGCCATTGCCAGAGGCCAAGGATGATATTAACTCAGCCCATTCATTGAGCGTCGAGGCAGCTTATATTAATCAGAATTTCTCGCAACAAGTTTTAATTAGAGATGGGAATAAGTTGACATTTGACGAGCCTAATCCTTTTGCAAATGAGGGTGAGGAGGTTGCTTCTGTGGCATACAGGTACAGGAGGTGGAAGCTTGATGATGAGATGTATCTTGTTGCAAGGTGTGAAGTTCAGAGTGTTGTTGATATGAACAATCAAAGGTCCTTCCTTACATTGAATGCTTTGAATGAATTTGATCCCAAATACTCTGGTGTTGATTGGAGACAGAAGTTGGAGACACAAAGGGGTGCAGTCTTGGCAACAGAGCTGAAGAATAACGCAAATAAGATGGCTAAATGGACTGCCCAAGCTCTTTTGGCAAGTGCAGATATGATGAAGTTGGGTTACGTTTCTAGGGTTCATCCTCGTGATCATTTTAATCATGTGATTTTGTCTGTAAATGGTTATAAACCCAGAGATTTTGCAACTCAAATTAATTTGAATACAAATAATATGTGGGGAATTGTGAAGTCTATTGTGGACTTGTGCATGAAATTGAATGAGGGGAAGTATGTTTTAGTGAAGGATCCATCTAAGCCCCAGGTTAGGATCTATGAGGTTCCGGCTGATGCATTTGAGAATGACTATGTGGAGGAGCCACTGCCTGAGGAGGAACAAGTTCAACCTCCAACGGAGGGTGGTGATGGTGGTGAGGCAACTGCTACAACGAATGATGTGGAAGATAAGCAGATTGATGATCAAGCTTAA 1692 0.4716 MVGSLEIGAVPFNPDGWGPPDAAASSASNLPVNIPYAPFSRSDKLGRIADWTRNFNNPARPKNSADAAFDFTIDDSFPASADDDSSFRLIDGKPPPRPKFGPKWRFQQQRQLPQRRDEEVEARKREAEKERARRDRLYHLNRSNANASRREAAVFKSSVDIQPEWNMLDQIPFSTFSKLSFAVPEPEDLLLCGGLEYYDRSYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKLTFDEPNPFANEGEEVASVAYRYRRWKLDDEMYLVARCEVQSVVDMNNQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKMAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILSVNGYKPRDFATQINLNTNNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEEEQVQPPTEGGDGGEATATTNDVEDKQIDDQA 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01942 563 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 526 IPR007783 GO:0003743|GO:0005737|GO:0005852
Accr10g01942 563 PIRSF Transl_init_eIF3d 1 544 IPR007783 GO:0003743|GO:0005737|GO:0005852
Accr10g01942 563 Coils Coil 115 135 - -
Accr10g01942 563 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 9 514 IPR007783 GO:0003743|GO:0005737|GO:0005852
Accr10g01942 563 MobiDBLite consensus disorder prediction 110 132 - -
Accr10g01942 563 MobiDBLite consensus disorder prediction 523 563 - -
Accr10g01942 563 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 4 537 IPR007783 GO:0003743|GO:0005737|GO:0005852
Accr10g01942 563 MobiDBLite consensus disorder prediction 83 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01942 Accr-Chr10 43939086 43940777 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01942 4 561 Eukaryotic Initiation Factors Gene Family AT4G20980 78.767 0.0 930
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01942 K03251 - zju:107424068 964.526