LGRPv2

Gene search

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr10g01924	1036	PANTHER	TRANSCRIPTION TERMINATION FACTOR 2-RELATED	96	1035	-	-
	Accr10g01924	1036	Gene3D	-	379	470	IPR038718	-
	Accr10g01924	1036	MobiDBLite	consensus disorder prediction	347	361	-	-
	Accr10g01924	1036	ProSiteProfiles	Zinc finger RING-type profile.	731	767	IPR001841	-
	Accr10g01924	1036	MobiDBLite	consensus disorder prediction	347	390	-	-
	Accr10g01924	1036	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	267	615	IPR027417	-
	Accr10g01924	1036	MobiDBLite	consensus disorder prediction	836	851	-	-
	Accr10g01924	1036	SMART	ring_2	731	769	IPR001841	-
	Accr10g01924	1036	CDD	DEXDc_SHPRH-like	283	615	-	-
	Accr10g01924	1036	ProSiteProfiles	Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.	298	577	IPR014001	-

Showing 1 to 10 of 31 entries

Previous1 2 3 4Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr10g01924	Accr-Chr10	43785065	43792551	Tandem

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr10g01924	44	936	RAD5 or RAD16-like Gene Family	AT1G50410	53.465	0.0	876

Showing 1 to 1 of 1 entries

Transcription factors information

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	SNF2	Accr10g01924		SNF2_N	1.8e-69	CL0023

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr10g01924	-		-	gmx:100795142	1311.59

Showing 1 to 1 of 1 entries