Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01906 ATGGACGATGATGCGTTGAACATGCGCAATTGGGGTTATTATGAACCATTCAAAGGGGGGCATCTGGGTCTCCAGCTCATGTCTAGTATGACAGAACGAGACACTAAACCATTTATGCCTGGCCGTGATCCTGCTATGTTAGTTAGTCCAAATGGAAGCTTCCACCCCCGGGATTGTGTTGTTTCAGAAGCCCCAATTCCAATTAACTATGTTAGAGACAGTTGGATCAGCCAGAGAGATAGGTTTCTCAATATGTTGCCCACAAATCCTAATTATGCCGTTCTTCCAGAAACATCAGCAGCTCCTTCCTTGCAAATTATACAGCCACCTGAAACATCGAGAGATGATAGGGTGAATCAAGTTGAAGACCCTCCTGTCAAAAAGGAAGTTGGCCAATTGAAGAAAAGGCAAAGCGGGGGCGCTCCGCATGCTCCTAAAGCGAAAAAACCAAGGAAGCCAAAGGATAATAGCAATGCTGTGGTTCAACGTGAGAAGCCAGCTAGGAAGGCTATGGAGGTTGTGATAAATGGAATTGATATGGACATTTCTGGTCTACCCATTCCTGTTTGCTCATGCACTGGGGCTCCTCAGCAGTGCTATCGATGGGGCTGTGGTGGTTGGCAATCAGCTTGTTGTACCACAAATGTGTCAATGTATCCATTGCCGATGAGCACTAAAAGGCGTGGCGCAAGGATAGCTGGACGGAAAATGAGTCAAGGTGCTTTCAAGAAGGTTTTGGAAAAACTTGCAGCTGAAGGATATAATTTTGTTAATCCTATTGATCTGAGGACTCACTGGGCTAGGCATGGCACCAACAAGTTTGTCACTATCAGATAA 837 0.4564 MDDDALNMRNWGYYEPFKGGHLGLQLMSSMTERDTKPFMPGRDPAMLVSPNGSFHPRDCVVSEAPIPINYVRDSWISQRDRFLNMLPTNPNYAVLPETSAAPSLQIIQPPETSRDDRVNQVEDPPVKKEVGQLKKRQSGGAPHAPKAKKPRKPKDNSNAVVQREKPARKAMEVVINGIDMDISGLPIPVCSCTGAPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFVNPIDLRTHWARHGTNKFVTIR 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01906 278 MobiDBLite consensus disorder prediction 115 134 - -
Accr10g01906 278 MobiDBLite consensus disorder prediction 108 166 - -
Accr10g01906 278 SMART GAGA_bind_2 1 278 IPR010409 -
Accr10g01906 278 Pfam GAGA binding protein-like family 1 278 IPR010409 -
Accr10g01906 278 PANTHER - 1 278 IPR010409 -
Accr10g01906 278 MobiDBLite consensus disorder prediction 151 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01906 Accr-Chr10 43629418 43630254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01906 1 278 BBR or BPC Transcription factor family AT2G01930 57.912 4.57e-109 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Accr10g01906 GAGA_bind 3.9e-111 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01906 - - gmx:100791533 486.493