LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr10g01894	ATGGTGATGAGCTTCAGGAACATTCAAGAACCAACCATCTGCTTCTCTCTCATCATCTTCTTGTTTTACTCTCAACATCTCTTCACCATCCCAGTCACTTCCTACAGTCATGCAGACAAGTTTTCCCTTAACTGTGGCTTCTCAGGCAATTCACAAACTACTTCAGATGGCAGAAGATGGGAACCAGACGACGATTCCAAACTATTTTCCCTTGGTGGAAACAGCCAGTCCTCACTTCTGAATTCACCTCCATTAGATCGAGAGGAAGTTCCTTATACCGCGGCTCGCCTGTCTCATTCGGAATTCACCTACTCCTTTGACGTCACTGAAGGCCAAAAGTTTGTTCGCCTCTTCTTTTACCCAGCTGCATATGCCAACTTTGATCGTTCCAATTCTCTCTTCTCCGTTAAAGCAGGCCACCACACACTTCTCAAGGACTTCAACGCTTCACTTACTGCTGATAATGATGATGATCCTGAGGAAAAAGTGTTCAGAGAGTACTGTATTAACGTGGAGCCGGGTCACAGACTGAACATCACTTTCACTCCCAGCACCAATCATCCAGACGCCTACGCGTTCGTCAATGGGATTGAGGTTGTGGCCATGCCCACCGATCTTTATTACAACAAAGCTGATGAAAAGAGTAGTGGGATTCAAGTTGATGACCACACTGCTCTGGAGATGGTATACAGAATCAATGTTGGACAGGGTGAGATTCAAGCTAACGACGATGATATGCTTCGCGAATGGCATGACGTATATGGCTCTGGCTATAAGGTGATGCAAACCATGCAAGATTTAAAAGCTCGTTATGGTGCAAAGCTGACAGATCCCCCACTTGATTTTCTCAAAGATGCAGCACCTGAGGACGTCTATTTATCTGCAAAGACCTCTACAGATGCCATGACTTGGGAGTTTAAAGTGAACTCAATGTTTGCTTATAAGATCAGACTGCACTTCTGTGAGTTGGATAATACAGTCCAGAAGGGAGATAGAGTTTTTCGGATACTCATCGATGACACTCTGTTTGAGCCTGAGGTTGATGTGCTTGGCTTGCAGGAAGATATCCTAGTTCCTCTTTATAAGGACTATGCTGTTCCGTTGAAGCAAGGAAGCTTGAAGAGGCAGAACCTTTCAATCAAGTTGCAGAAACTCCCAAAAAGCAAGTACGATGTCCTGTTGAATGGAATTGAAATTTTCAAGATCAGTGATCCTGGTAGTGACAATCTTGGAGGACCCAACCCAGACCCAATCTCTTCATCAACCAAACCATCAAAAGTTTCTAAGAAAAAAACAAAAGCTCCCATGATGATTGCCGTGAAGATCAGTGATCCTGGTAGTGACAATCTTGGAGGACCCAACCCAGACCCAATCTCTTCATCAACCAAACCATCAAAAGTCTCTAACGAAAAAACAAAAGCTCCCATGATGATTGCCGTTGCTTGTGCAGCTTTAGGTGTCATTGTACTATCTGTCATCGGTTTCTTCATATATCGGCGAATGACCAGGGGTGCAGGGAACAGGACAGATGAGGAATCATTAGATGCGTGCCATAAGTTTTCCATCGAAGAGATCAGAGCAGCCACCAACGACTTCGATGAACTTTCAATCATTGGTCGTGGAGGATTTGGCGTAGTCTTTAAAGGACACATTAACAAGGGGAAGACATCAATCACCGTAGCCATCAAACGGCTGAAACCAGAATCATCACAAGGATTTGATGAATTCCAAACAGAGATCAAGATCTTGTCCAAGTTTCGCCATGATAACTTGGTTGATCTCATTGGCTACTGCAACGATGAGAAGGAGATGATCCTGGTCTATGAATTCATGGCCCGTGGGACCCTCAGCGACAATCTTAAAGAACCTGTTAACCAGTCACTTCCATGGAAGCAAAGGCTTGAGATCTGCATCGGAGCAGCAAAGGCACTGCTCTATCTTCACACCTACACCGGTGAGGACAAGCAAAGTGTGATCCACCGTGATGTGAAAAGTACAAACATTTTGTTAGGCGAGGATTGGGTAGCAAAGGTTTCAGATTTCGGATTGTCTAAGATTGGGCCGGATGGTTTGTCCAGGTCACATGTTACCACAAACGTCAAAGGCAGCGTTGGGTACATAGACCCAGAATACTATGTGACTCTGCAGCTAACCCCAAGATCTGATGTTTACTCTTTTGGTGTGGTTTTACTGGAGGTTTTGTCTGGAAAGCCGCATATATTTCGAAACATGGAGAAGCAGATGGGATCACTGGTGGACTGGGTTAAGAAATGCTATGAGAAAGGAGAGATCGAAGAGGTGGTTGATCCATTTTTGAAGGGGACCATAACACCTCAGTGTCTGAATAAGTTTCTTCGCATAGCATTGGCCTGTCTGCATGAAAATGGGAAGCTTCGGCCATCGATGAGAGATGTTGTGAGTGGCTTAGAGACTGTGTTGAAGATGCAAGGCCGCATGGAGGGTGAGATCCAGAGAGACGATGGAAAGGCGAAGAATGTGGACAAAATAAGTGTGACCCAATTTACAAGAGATGAAGAAAGTGGAGTACAATTCTCGACTTCAAGTGTATCCACCACCACGGACTCCAAGTGCAGCAGTAAGGTCACGATCACAAGTAGTGAGGAGGAGCAAGCTTTGGTTCCTGCAGTGTTCTCAGAGCTTGCACATCCAACAGCACGATAA	2682	0.4504	MVMSFRNIQEPTICFSLIIFLFYSQHLFTIPVTSYSHADKFSLNCGFSGNSQTTSDGRRWEPDDDSKLFSLGGNSQSSLLNSPPLDREEVPYTAARLSHSEFTYSFDVTEGQKFVRLFFYPAAYANFDRSNSLFSVKAGHHTLLKDFNASLTADNDDDPEEKVFREYCINVEPGHRLNITFTPSTNHPDAYAFVNGIEVVAMPTDLYYNKADEKSSGIQVDDHTALEMVYRINVGQGEIQANDDDMLREWHDVYGSGYKVMQTMQDLKARYGAKLTDPPLDFLKDAAPEDVYLSAKTSTDAMTWEFKVNSMFAYKIRLHFCELDNTVQKGDRVFRILIDDTLFEPEVDVLGLQEDILVPLYKDYAVPLKQGSLKRQNLSIKLQKLPKSKYDVLLNGIEIFKISDPGSDNLGGPNPDPISSSTKPSKVSKKKTKAPMMIAVKISDPGSDNLGGPNPDPISSSTKPSKVSNEKTKAPMMIAVACAALGVIVLSVIGFFIYRRMTRGAGNRTDEESLDACHKFSIEEIRAATNDFDELSIIGRGGFGVVFKGHINKGKTSITVAIKRLKPESSQGFDEFQTEIKILSKFRHDNLVDLIGYCNDEKEMILVYEFMARGTLSDNLKEPVNQSLPWKQRLEICIGAAKALLYLHTYTGEDKQSVIHRDVKSTNILLGEDWVAKVSDFGLSKIGPDGLSRSHVTTNVKGSVGYIDPEYYVTLQLTPRSDVYSFGVVLLEVLSGKPHIFRNMEKQMGSLVDWVKKCYEKGEIEEVVDPFLKGTITPQCLNKFLRIALACLHENGKLRPSMRDVVSGLETVLKMQGRMEGEIQRDDGKAKNVDKISVTQFTRDEESGVQFSTSSVSTTTDSKCSSKVTITSSEEEQALVPAVFSELAHPTAR	893

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr10g01894	893	SUPERFAMILY	Protein kinase-like (PK-like)	515	807	IPR011009	-
	Accr10g01894	893	FunFam	Receptor-like protein kinase FERONIA	611	832	-	-
	Accr10g01894	893	FunFam	FERONIA receptor-like kinase	40	203	-	-
	Accr10g01894	893	Gene3D	Transferase(Phosphotransferase) domain 1	611	837	-	-
	Accr10g01894	893	ProSiteProfiles	Protein kinase domain profile.	532	813	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr10g01894	893	MobiDBLite	consensus disorder prediction	453	469	-	-
	Accr10g01894	893	CDD	STKc_IRAK	538	810	-	-
	Accr10g01894	893	MobiDBLite	consensus disorder prediction	406	469	-	-
	Accr10g01894	893	Pfam	Malectin-like domain	43	402	IPR024788	-
	Accr10g01894	893	ProSitePatterns	Protein kinases ATP-binding region signature.	538	563	IPR017441	GO:0005524
	Accr10g01894	893	PANTHER	OS07G0166700 PROTEIN	516	816	IPR045272	GO:0004714\|GO:0006468
	Accr10g01894	893	FunFam	receptor-like protein kinase FERONIA	499	610	-	-
	Accr10g01894	893	Gene3D	Phosphorylase Kinase; domain 1	504	610	-	-
	Accr10g01894	893	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	658	670	IPR008271	GO:0004672\|GO:0006468
	Accr10g01894	893	SMART	serkin_6	532	813	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr10g01894	893	Gene3D	-	40	203	-	-
	Accr10g01894	893	Gene3D	-	224	403	-	-
	Accr10g01894	893	Pfam	Protein tyrosine and serine/threonine kinase	536	808	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr10g01894	Accr-Chr10	43535056	43537737	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr10g01894	30	893	Receptor kinase-like Gene Family	AT3G51550	39.661	0.0	582

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Accr10g01894		Malectin_like	4.3e-39	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr10g01894	-		-	pcin:129298244	1177.16