Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01870 ATGGCTCCTAACTTTCTCTTCCTCTGTTTGTTCCTCTCCTTTCTCTCCCTAACTCATTTCTCAATTTCCCAGAATACTGTCAGTTCCACTTCCTTCAATGCCTCAGATTCCCCATGGCTTCCAAACCAGAATCGCATCCTTCTCTCCCCAAATTCCAACTTCTCTGCTGGCTTCTTCCCCATTTCCTCAGATCGTTACACCTTCTCCGTTTGGTTCACCAACGTTCCGCTTAAAGATGACCCCGTCGTGTGGTCTGCAAACTCTGGTTCGTCCGTCACTGGCTCCGCTTCCATCGTCATCTCCTCCAAAGGCGAGCTTCTTCTCAATAATTCCCTTTTGGCAAACGCTTCCTCCACTTCCAATTCCGCATCGCCTGTTCTCAGTCTCAGTGACGACGGCAATTTAAGTTTTGGGGATTGGAATAGCTTCGATGACCCAACGGACATCGTTCTCCCGAACCAAAATATCTCAGCAATCAAGCTTCTTTCCCGAGATAAGCGTTTCAGATTCGTCGATTCCAGGAGTCTGAGTTTCAATTCCTCCTCGGATTATTACTACGCCACCCCAAGCCCGTTGGAGAGCATGGATTCCCTCGGCAAGGTGAATATGACAAATGGCGCTTTTCTTACAAGCGATTACGGCGAAAATCGGCCCCGGAAAATGGTTCTCGGAAATGATGGGAATCTCAAAATCTACAGTTTCATCCCCGATCAAAAACCCCAGTGGGTTGAGGTTTGGTTGGCGATTTGGGAACCGTGTAAAATCCAAGGCAAATGCGGTCCTTCTGCTATATGCTTGCCTTCAACTGGAATTAATGATTCGACTTCATGTGTTTGCCCGCCTGGATTCAAGCAAAATCAAGGAGGCCCTCAACAAGGTTGTGTTAGGAAAACCGAACTCACCAATAGCATCAAATTTCTGAAGCTGGATTATGTGAACTATACTGGCAGCAATGTGGAAAGTATGGATGCTAGAAACTTCAGTGCTAGAAACTTCTCAATTTGTGAATCTAAATGCAAAGAAAACTCACAATGTCTCGGATTTGGCTACAAATATGATGGATCTGGTTTTTGTTCTATGGTGCTGGGTGAACTCCGATATGGTTATTGGTCTCCAGGTACCGAGGCTTCGCTGTTTCTTAAGGTAGACAGATCAGAAACCGATGCCTCCAATTTCACTGGGATGACAGAAGTTATGCAGACATCGTGCCCTGTTCGAATCAGTCTCCCACTACCCCCAAAAGATTCGAATTCCACCGCTCGAAACATTGCCATAATCTGCACACTTTTCGCTGCTGAGCTCATTTCCGGCGTCGCTTTCTTCTGGTCTTTCATCAAGAGGTACATCAAGTACAGAGACATGGCTACCACTCTCGGTCTCGAGTTCCTTCCCGCCGGTGGCCCGAAACGGTTCTCCTATGCCGAGCTCAAAACAGCCACAAAGGACTTCTCCAATCTCATCGGAAGAGGTGGGTTCGGCGATGTTTACAAAGGAGAGCTACCGGATCATCGCGTTGTCGCCGTCAAGTGCCTCAAGAACGTCACGGGCGGCGACCGCGAGTTCTGGGCAGAGGTCACCATTATTGCCAGAATGCACCACCTCAACTTGGTCCGCTTGTGGGGCTTTTGCACGGAGAAAGGTCAACGAATCTTGGTGTACGAGTATATACCGGGCGGGTCATTGGACAAATACCTGTTCCGTCGTCCTCGGGCCGGGTCTAAAAAGGGGGAAGCACATCCGGATTCGGACCCAAAGACGGCCCAAAAGCCCATCCTTGACTGGAATATCCGGTATAGGATAGCCCTGGGTGTGGCAAGATCCATAGCGTACTTGCACGAGGAGTGTTTGGAATGGGTCTTACATTGTGACATCAAGCCCGAGAACATCCTACTCGGAGATGATTTCTGTCCAAAGATATCAGATTTTGGATTGGCAAAGTTAAGAAAGAAAGAGGACATGGTAACCATGTCTAGGAGGAGAGGAACTCCGGGTTATATGGCTCCGGAATGGATAACGACGGATCCAATCACGTCCAAAGCTGACGTGTACAGCTTTGGGATGGTGTTGCTGGAGCTGGTGAGTGGGGTCAGGAACTTTGAGATTCAAGGATCGTTGCTGAACAGTGAAGAGTGGTATTTTCCCGGGTGGGCTTTCGATAAGATGTTCAAGGAGATGAAGCCTGAAGATATTCTGGACTGTGAGATTAAGCAGCTTTATGATAGTAGGGCCCATTTCAATATGATCAATAGGATGGTGAAGACAGCCATGTGGTGCCTTCAAGATAGGCCCGAGTTGAGGCCCACCATGGGCAAAGTGGCTAAAATGTTGGAGGGCACAGTGGAGATTTCTGAGCCCAAGAAGCCCACTGTCTTTTTCCTTGGTGGTGAATAG 2391 0.4835 MAPNFLFLCLFLSFLSLTHFSISQNTVSSTSFNASDSPWLPNQNRILLSPNSNFSAGFFPISSDRYTFSVWFTNVPLKDDPVVWSANSGSSVTGSASIVISSKGELLLNNSLLANASSTSNSASPVLSLSDDGNLSFGDWNSFDDPTDIVLPNQNISAIKLLSRDKRFRFVDSRSLSFNSSSDYYYATPSPLESMDSLGKVNMTNGAFLTSDYGENRPRKMVLGNDGNLKIYSFIPDQKPQWVEVWLAIWEPCKIQGKCGPSAICLPSTGINDSTSCVCPPGFKQNQGGPQQGCVRKTELTNSIKFLKLDYVNYTGSNVESMDARNFSARNFSICESKCKENSQCLGFGYKYDGSGFCSMVLGELRYGYWSPGTEASLFLKVDRSETDASNFTGMTEVMQTSCPVRISLPLPPKDSNSTARNIAIICTLFAAELISGVAFFWSFIKRYIKYRDMATTLGLEFLPAGGPKRFSYAELKTATKDFSNLIGRGGFGDVYKGELPDHRVVAVKCLKNVTGGDREFWAEVTIIARMHHLNLVRLWGFCTEKGQRILVYEYIPGGSLDKYLFRRPRAGSKKGEAHPDSDPKTAQKPILDWNIRYRIALGVARSIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDMVTMSRRRGTPGYMAPEWITTDPITSKADVYSFGMVLLELVSGVRNFEIQGSLLNSEEWYFPGWAFDKMFKEMKPEDILDCEIKQLYDSRAHFNMINRMVKTAMWCLQDRPELRPTMGKVAKMLEGTVEISEPKKPTVFFLGGE 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01870 796 Gene3D Phosphorylase Kinase; domain 1 456 555 - -
Accr10g01870 796 ProSitePatterns Protein kinases ATP-binding region signature. 487 509 IPR017441 GO:0005524
Accr10g01870 796 SUPERFAMILY Protein kinase-like (PK-like) 463 777 IPR011009 -
Accr10g01870 796 ProSiteProfiles Protein kinase domain profile. 481 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01870 796 ProSiteProfiles Bulb-type lectin domain profile. 32 150 IPR001480 -
Accr10g01870 796 FunFam Serine/threonine-protein kinase 556 787 - -
Accr10g01870 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Accr10g01870 796 FunFam S-receptor-like serine/threonine-protein kinase 453 555 - -
Accr10g01870 796 Pfam D-mannose binding lectin 82 159 IPR001480 -
Accr10g01870 796 CDD EGF 252 283 - -
Accr10g01870 796 CDD STKc_IRAK 487 778 - -
Accr10g01870 796 Gene3D - 39 145 IPR036426 -
Accr10g01870 796 SMART serkin_6 481 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01870 796 SMART blect_4 42 146 IPR001480 -
Accr10g01870 796 PIRSF SRK 1 195 IPR024171 GO:0004674
Accr10g01870 796 PIRSF SRK 193 796 IPR024171 GO:0004674
Accr10g01870 796 Pfam S-locus glycoprotein domain 202 286 IPR000858 GO:0048544
Accr10g01870 796 Gene3D Transferase(Phosphotransferase) domain 1 557 788 - -
Accr10g01870 796 Pfam Protein kinase domain 485 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01870 796 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 232 IPR036426 -
Accr10g01870 796 PANTHER OS07G0415500 PROTEIN 7 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01870 Accr-Chr10 43226230 43228620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01870 323 788 Receptor kinase-like Gene Family AT4G18250 33.264 1.37e-75 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr10g01870 Pkinase 3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01870 - - lang:109325652 1127.08